RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SEL1LQ9UBV2 794 aa11.53□□□□□ -0.56
CAPN3-202ENST00000337571 R3HCC1Q9Y3T6 440 aaKnown RBP11.53□□□□□ -0.56
CAPN3-202ENST00000337571 C2CD2Q9Y426 696 aa11.53□□□□□ -0.56
CAPN3-202ENST00000337571 DPYSL4O14531 572 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 GCNT3O95395 438 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 LDHAP00338 332 aaKnown RBP11.52□□□□□ -0.57
CAPN3-202ENST00000337571 IDEP14735 1019 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 FCARP24071 287 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 TARSP26639 723 aaKnown RBP11.52□□□□□ -0.57
CAPN3-202ENST00000337571 RPS9P46781 194 aaKnown RBP11.52□□□□□ -0.57
CAPN3-202ENST00000337571 TAF6P49848 677 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 FOXK2Q01167 660 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 PTPAQ15257 358 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 MGAT5BQ3V5L5 792 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 SV2CQ496J9 727 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 SLC39A12Q504Y0 691 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 SLC39A4Q6P5W5 647 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 VITQ6UXI7 678 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 USP49Q70CQ1 688 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 SFR1Q86XK3 245 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 NT5DC4Q86YG4 428 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 TMEM130Q8N3G9 435 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 ATAD1Q8NBU5 361 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 C2orf15Q8WU43 125 aaKnown RBP11.52□□□□□ -0.57
CAPN3-202ENST00000337571 CACTINQ8WUQ7 758 aaKnown RBP11.52□□□□□ -0.57
CAPN3-202ENST00000337571 FAM3CQ92520 227 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 CLDN23Q96B33 292 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 GCNAQ96QF7 691 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 PYM1Q9BRP8 204 aaKnown RBP11.52□□□□□ -0.57
CAPN3-202ENST00000337571 PANK2Q9BZ23 570 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 ZSCAN16Q9H4T2 348 aaPredicted RBP11.52□□□□□ -0.57
CAPN3-202ENST00000337571 TRPV4Q9HBA0 871 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 FBXO2Q9UK22 296 aaPredicted RBP11.52□□□□□ -0.57
CAPN3-202ENST00000337571 NDRG2Q9UN36 371 aaKnown RBP11.52□□□□□ -0.57
CAPN3-202ENST00000337571 STYXL1Q9Y6J8 313 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 TCHHQ07283 1943 aa11.52□□□□□ -0.57
CAPN3-202ENST00000337571 ANK1P16157 1881 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 ANO9A1A5B4 782 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 MTMR11A4FU01 709 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 HEPACAM2A8MVW5 462 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 KPNA7A9QM74 516 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 TISP43B9A030 160 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 PPEF2O14830 753 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 SPTLC1O15269 473 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 MOSPD3O75425 235 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 CYP11A1P05108 521 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 PNPLA4P41247 253 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 STAT6P42226 847 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 ID4P47928 161 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 KPNA1P52294 538 aaPredicted RBP11.51□□□□□ -0.57
CAPN3-202ENST00000337571 SMARCB1Q12824 385 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 ALCAMQ13740 583 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 C1orf228Q6PIY5 440 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 STXBP4Q6ZWJ1 553 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 DCP1BQ8IZD4 617 aaKnown RBP11.51□□□□□ -0.57
CAPN3-202ENST00000337571 SHKBP1Q8TBC3 707 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 NOC3LQ8WTT2 800 aaKnown RBP11.51□□□□□ -0.57
CAPN3-202ENST00000337571 RUBCNQ92622 972 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 SECISBP2LQ93073 1101 aaKnown RBP11.51□□□□□ -0.57
CAPN3-202ENST00000337571 PSMG2Q969U7 264 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 ZNF560Q96MR9 790 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 CLIC6Q96NY7 704 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 FIZ1Q96SL8 496 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 SEPT5Q99719 369 aaPredicted RBP11.51□□□□□ -0.57
CAPN3-202ENST00000337571 FAM213AQ9BRX8 229 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 LRRC27Q9C0I9 530 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 LMAN1LQ9HAT1 526 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 TBC1D7Q9P0N9 293 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 PCDHGA2Q9Y5H1 932 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 PIAS3Q9Y6X2 628 aa11.51□□□□□ -0.57
CAPN3-202ENST00000337571 MYMKA6NI61 221 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 CHADO15335 359 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 GABRR2P28476 465 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 NRLP54845 237 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 MLLT6P55198 1093 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-202ENST00000337571 TFAMQ00059 246 aaKnown RBP11.5□□□□□ -0.57
CAPN3-202ENST00000337571 TSPY1Q01534 308 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 RESTQ13127 1097 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 L1TD1Q5T7N2 865 aaKnown RBP11.5□□□□□ -0.57
CAPN3-202ENST00000337571 GPR158Q5T848 1215 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 FAM173BQ6P4H8 233 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 GPIHBP1Q8IV16 184 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 ARID3BQ8IVW6 561 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-202ENST00000337571 CCDC65Q8IXS2 484 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 KIAA2013Q8IYS2 634 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 MAML2Q8IZL2 1156 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-202ENST00000337571 SPPL2BQ8TCT7 592 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 MSANTD3Q96H12 275 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 INTS4Q96HW7 963 aaKnown RBP11.5□□□□□ -0.57
CAPN3-202ENST00000337571 TMEM209Q96SK2 561 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 IER2Q9BTL4 223 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 LRRC3Q9BY71 257 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 FAM126AQ9BYI3 521 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-202ENST00000337571 ZCWPW1Q9H0M4 648 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 CRISPLD1Q9H336 500 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 TMEM206Q9H813 350 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 RYDENQ9NUL5 291 aaKnown RBP11.5□□□□□ -0.57
CAPN3-202ENST00000337571 PANK4Q9NVE7 773 aa11.5□□□□□ -0.57
CAPN3-202ENST00000337571 THG1LQ9NWX6 298 aaKnown RBP11.5□□□□□ -0.57
CAPN3-202ENST00000337571 ZSCAN32Q9NX65 697 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms