RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 AGAP1Q9UPQ3 857 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 C3P01024 1663 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 TBC1D4O60343 1298 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 MYCP01106 439 aaPredicted RBP12.82□□□□□ -0.36
FN1-202ENST00000336916 CYP2C9P11712 490 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 GUCA1AP43080 201 aaPredicted RBP12.82□□□□□ -0.36
FN1-202ENST00000336916 DHX40Q8IX18 779 aaKnown RBP12.82□□□□□ -0.36
FN1-202ENST00000336916 SAAL1Q96ER3 474 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 EVPLLA8MZ36 301 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 NPTXRO95502 500 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 NDUFB10O96000 172 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 PRKCEQ02156 737 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 NFE2Q16621 373 aaPredicted RBP12.82□□□□□ -0.36
FN1-202ENST00000336916 PI16Q6UXB8 463 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 TTC30BQ8N4P2 665 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 SHCBP1Q8NEM2 672 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 HES6Q96HZ4 224 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 APPL1Q9UKG1 709 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 GMNCA6NCL1 334 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 EEF2KO00418 725 aaKnown RBP12.82□□□□□ -0.36
FN1-202ENST00000336916 MSCO60682 206 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 KLHL2O95198 593 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 EN1Q05925 392 aaPredicted RBP12.82□□□□□ -0.36
FN1-202ENST00000336916 FBXO44Q9H4M3 255 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 KCNA2P16389 499 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 GUCY2CP25092 1073 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 PDIA6Q15084 440 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 DNAL1Q4LDG9 190 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 SUGP1Q8IWZ8 645 aaKnown RBP12.82□□□□□ -0.36
FN1-202ENST00000336916 ZNF34Q8IZ26 560 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 CCNYL1Q8N7R7 359 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 ZNF70Q9UC06 446 aaPredicted RBP12.82□□□□□ -0.36
FN1-202ENST00000336916 PHF2O75151 1096 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 ZNF135P52742 658 aaPredicted RBP12.82□□□□□ -0.36
FN1-202ENST00000336916 C17orf53Q8N3J3 647 aaPredicted RBP12.82□□□□□ -0.36
FN1-202ENST00000336916 RNPC3Q96LT9 517 aaKnown RBP12.82□□□□□ -0.36
FN1-202ENST00000336916 NIF3L1Q9GZT8 377 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 PRR12Q9ULL5 1215 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 PTPRMP28827 1452 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 TRPA1O75762 1119 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 MYL2P10916 166 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 ADCY1Q08828 1119 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 SPATA18Q8TC71 538 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 MTFR1LQ9H019 292 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 EPC1Q9H2F5 836 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 ARMC7Q9H6L4 198 aa12.82□□□□□ -0.36
FN1-202ENST00000336916 IGF2BP3O00425 579 aaKnown RBP eCLIP12.81□□□□□ -0.364e-15■■■■□ 22.8
FN1-202ENST00000336916 ATICP31939 592 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 GFPT1Q06210 699 aaPredicted RBP12.81□□□□□ -0.36
FN1-202ENST00000336916 TTC39BQ5VTQ0 682 aaPredicted RBP12.81□□□□□ -0.36
FN1-202ENST00000336916 HPS3Q969F9 1004 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 PRRG3Q9BZD7 231 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 ENTPD7Q9NQZ7 604 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 SYNPO2Q9UMS6 1093 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 KNDC1Q76NI1 1749 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 LIG3P49916 1009 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 SLC7A5Q01650 507 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 PEX6Q13608 980 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 TFB1MQ8WVM0 346 aaKnown RBP12.81□□□□□ -0.36
FN1-202ENST00000336916 XPO6Q96QU8 1125 aaKnown RBP12.81□□□□□ -0.36
FN1-202ENST00000336916 PARD6BQ9BYG5 372 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 GGA3Q9NZ52 723 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 SPATA31A5Q5VU36 1347 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 SPATA31A7Q8IWB4 1347 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 GOLGA8RI6L899 631 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 CENPCQ03188 943 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 CNGA3Q16281 694 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 TRIM69Q86WT6 500 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 MRPS31Q92665 395 aaKnown RBP12.81□□□□□ -0.36
FN1-202ENST00000336916 ZDHHC15Q96MV8 337 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 YME1L1Q96TA2 773 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 PSMC3IPQ9P2W1 217 aaPredicted RBP12.81□□□□□ -0.36
FN1-202ENST00000336916 BYSLQ13895 437 aaKnown RBP12.81□□□□□ -0.36
FN1-202ENST00000336916 ZBED8Q8IZ13 594 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 ZNF518BQ9C0D4 1074 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 MON2Q7Z3U7 1717 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 PPP4CP60510 307 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 CINPQ9BW66 212 aaPredicted RBP12.81□□□□□ -0.36
FN1-202ENST00000336916 RPRD1BQ9NQG5 326 aaKnown RBP12.81□□□□□ -0.36
FN1-202ENST00000336916 PCSK1NQ9UHG2 260 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 PHLPP1O60346 1717 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 OR1G1P47890 313 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 IZUMO3Q5VZ72 239 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 SEPT8Q92599 483 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 SH3GL1Q99961 368 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 DEFB129Q9H1M3 183 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 H2AFY2Q9P0M6 372 aaPredicted RBP12.81□□□□□ -0.36
FN1-202ENST00000336916 STK39Q9UEW8 545 aa12.81□□□□□ -0.36
FN1-202ENST00000336916 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.81□□□□□ -0.36
FN1-202ENST00000336916 FRMD3A2A2Y4 597 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 MANSC4A6NHS7 340 aaPredicted RBP12.8□□□□□ -0.36
FN1-202ENST00000336916 HUNKP57058 714 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 PRR5LQ6MZQ0 368 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 DACH2Q96NX9 599 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 FAM50BQ9Y247 325 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 NALCNQ8IZF0 1738 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 ZSCAN9O15535 394 aaPredicted RBP12.8□□□□□ -0.36
FN1-202ENST00000336916 RPN2P04844 631 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 URODP06132 367 aa12.8□□□□□ -0.36
FN1-202ENST00000336916 CNTFP26441 200 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms