RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 UCHL3P15374 230 aa13.66□□□□□ -0.22
HLCS-201ENST00000336648 CSTF3Q12996 717 aaKnown RBP13.66□□□□□ -0.22
HLCS-201ENST00000336648 NCOA4Q13772 614 aa13.66□□□□□ -0.22
HLCS-201ENST00000336648 ARHGAP17Q68EM7 881 aa13.66□□□□□ -0.22
HLCS-201ENST00000336648 RTL3Q8N8U3 475 aaKnown RBP13.66□□□□□ -0.22
HLCS-201ENST00000336648 RBBP8NLQ8NC74 664 aaPredicted RBP13.66□□□□□ -0.22
HLCS-201ENST00000336648 RDM1Q8NG50 284 aa13.66□□□□□ -0.22
HLCS-201ENST00000336648 KLHL25Q9H0H3 589 aa13.66□□□□□ -0.22
HLCS-201ENST00000336648 C21orf2O43822 256 aa13.66□□□□□ -0.22
HLCS-201ENST00000336648 DPYDQ12882 1025 aa13.66□□□□□ -0.22
HLCS-201ENST00000336648 ARHGEF7Q14155 803 aa13.66□□□□□ -0.22
HLCS-201ENST00000336648 C12orf60Q5U649 245 aa13.66□□□□□ -0.22
HLCS-201ENST00000336648 TERB1Q8NA31 727 aa13.66□□□□□ -0.22
HLCS-201ENST00000336648 DNAJC9Q8WXX5 260 aa13.66□□□□□ -0.22
HLCS-201ENST00000336648 ZFP42Q96MM3 310 aa13.66□□□□□ -0.22
HLCS-201ENST00000336648 PHF20Q9BVI0 1012 aa13.66□□□□□ -0.22
HLCS-201ENST00000336648 EXOSC4Q9NPD3 245 aaKnown RBP13.66□□□□□ -0.22
HLCS-201ENST00000336648 NMRK1Q9NWW6 199 aa13.66□□□□□ -0.22
HLCS-201ENST00000336648 USE1Q9NZ43 259 aa13.66□□□□□ -0.22
HLCS-201ENST00000336648 DNAJC5BQ9UF47 199 aa13.66□□□□□ -0.22
HLCS-201ENST00000336648 ENO3P13929 434 aaPredicted RBP13.65□□□□□ -0.22
HLCS-201ENST00000336648 ACADSP16219 412 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 HPCAP84074 193 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 STX5Q13190 355 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 MMGT1Q8N4V1 131 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 ISCUQ9H1K1 167 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 PKP3Q9Y446 797 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 KANSL1LA0AUZ9 987 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 IQCA1LA6NCM1 817 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 MUTP22033 750 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 RGS2P41220 211 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 FGD2Q7Z6J4 655 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 P3H2Q8IVL5 708 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 TMA16Q96EY4 203 aaKnown RBP13.65□□□□□ -0.22
HLCS-201ENST00000336648 IL17RAQ96F46 866 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 TMEM8AQ9HCN3 771 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 NPHS2Q9NP85 383 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 NYAP2Q9P242 653 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 WEE2P0C1S8 567 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 FDFT1P37268 417 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 METTL16Q86W50 562 aaKnown RBP13.65□□□□□ -0.22
HLCS-201ENST00000336648 DDI1Q8WTU0 396 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 HPS3Q969F9 1004 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 CCDC126Q96EE4 140 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 FANCEQ9HB96 536 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 PDP2Q9P2J9 529 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 ROBO2Q9HCK4 1378 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 HLFQ16534 295 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 SH3BP5LQ7L8J4 393 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 NSL1Q96IY1 281 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 PLA2G12BQ9BX93 195 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 GJB4Q9NTQ9 266 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 CLCA2Q9UQC9 943 aa13.65□□□□□ -0.22
HLCS-201ENST00000336648 S100A9P06702 114 aaKnown RBP13.65□□□□□ -0.23
HLCS-201ENST00000336648 MAGEA4P43358 317 aa13.65□□□□□ -0.23
HLCS-201ENST00000336648 JAMLQ86YT9 394 aa13.65□□□□□ -0.23
HLCS-201ENST00000336648 PPIL6Q8IXY8 311 aa13.65□□□□□ -0.23
HLCS-201ENST00000336648 SEPT1Q8WYJ6 367 aa13.65□□□□□ -0.23
HLCS-201ENST00000336648 SEC16BQ96JE7 1060 aa13.65□□□□□ -0.23
HLCS-201ENST00000336648 SERPINB12Q96P63 405 aa13.65□□□□□ -0.23
HLCS-201ENST00000336648 OSBPL8Q9BZF1 889 aa13.65□□□□□ -0.23
HLCS-201ENST00000336648 TSC22D2O75157 780 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 FKBP9O95302 570 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 AKT1P31749 480 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 PNPLA4P41247 253 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 FNTAP49354 379 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 EXOSC10Q01780 885 aaKnown RBP13.64□□□□□ -0.23
HLCS-201ENST00000336648 KYNUQ16719 465 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 HIST2H2ACQ16777 129 aaPredicted RBP13.64□□□□□ -0.23
HLCS-201ENST00000336648 HIST2H2AA3Q6FI13 130 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 FKBP9P1Q75LS8 142 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 RSPH1Q8WYR4 309 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 NT5C1AQ9BXI3 368 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 CD274Q9NZQ7 290 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.64□□□□□ -0.23
HLCS-201ENST00000336648 SOAT2O75908 522 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 SNRNP35Q16560 246 aaKnown RBP13.64□□□□□ -0.23
HLCS-201ENST00000336648 TTC30AQ86WT1 665 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 TEX13BQ9BXU2 312 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 GOLPH3Q9H4A6 298 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 KRCC1Q9NPI7 259 aaPredicted RBP13.64□□□□□ -0.23
HLCS-201ENST00000336648 LATS2Q9NRM7 1088 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 PIN4Q9Y237 131 aaKnown RBP13.64□□□□□ -0.23
HLCS-201ENST00000336648 USP42Q9H9J4 1324 aaKnown RBP13.64□□□□□ -0.23
HLCS-201ENST00000336648 STK25O00506 426 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 ASMTLO95671 621 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 COG2Q14746 738 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 ZNF512BQ96KM6 892 aaPredicted RBP13.64□□□□□ -0.23
HLCS-201ENST00000336648 RIT2Q99578 217 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 RPAP3Q9H6T3 665 aaPredicted RBP13.64□□□□□ -0.23
HLCS-201ENST00000336648 SMARCAL1Q9NZC9 954 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 ANXA9O76027 345 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 NMT1P30419 496 aaKnown RBP13.64□□□□□ -0.23
HLCS-201ENST00000336648 SOX6P35712 828 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 MLH1P40692 756 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 NR1I3Q14994 352 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 EPHA10Q5JZY3 1008 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 IER5Q5VY09 327 aa13.64□□□□□ -0.23
HLCS-201ENST00000336648 COL23A1Q86Y22 540 aaPredicted RBP13.64□□□□□ -0.23
HLCS-201ENST00000336648 SYNE4Q8N205 404 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms