RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 NR1H3Q13133 447 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 PTGISQ16647 500 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 C2CD6Q53TS8 623 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 SPATA18Q8TC71 538 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 TSR3Q9UJK0 312 aaKnown RBP15.75■□□□□ 0.11
C9orf47-201ENST00000334490 MRFAP1Q9Y605 127 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 MYPNQ86TC9 1320 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 ACKR2O00590 384 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 RBP3P10745 1247 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 TYK2P29597 1187 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 MYBPC2Q14324 1141 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 NCAPHQ15003 741 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 SLC27A1Q6PCB7 646 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 FBXO32Q969P5 355 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 ULK4Q96C45 1275 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 LRGUKQ96M69 825 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 EPC1Q9H2F5 836 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 A0A087X0T9 212 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 FAM228BP0C875 321 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 BOLA3Q53S33 107 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 PHLDB3Q6NSJ2 640 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 CRLF3Q8IUI8 442 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 CCDC60Q8IWA6 550 aaPredicted RBP15.75■□□□□ 0.11
C9orf47-201ENST00000334490 GPATCH11Q8N954 259 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 EXOC4Q96A65 974 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 DDX27Q96GQ7 796 aaKnown RBP15.75■□□□□ 0.11
C9orf47-201ENST00000334490 EGFL8Q99944 293 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 FAM118BQ9BPY3 351 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 OLA1Q9NTK5 396 aaKnown RBP15.75■□□□□ 0.11
C9orf47-201ENST00000334490 TBKBP1A7MCY6 615 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 MEIS2O14770 477 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 PLEKP08567 350 aaPredicted RBP15.75■□□□□ 0.11
C9orf47-201ENST00000334490 DNAJB2P25686 324 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 COPS2P61201 443 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 RNF135Q8IUD6 432 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 LMNTD2Q8IXW0 634 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 MRPS31Q92665 395 aaKnown RBP15.75■□□□□ 0.11
C9orf47-201ENST00000334490 CISHQ9NSE2 258 aa15.75■□□□□ 0.11
C9orf47-201ENST00000334490 ZNF541Q9H0D2 1346 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 CCDC78A2IDD5 438 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 KPNA7A9QM74 516 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 DNAJC6O75061 913 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 PGK1P00558 417 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 CKMP06732 381 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 MAPTP10636 758 aaKnown RBP15.74■□□□□ 0.11
C9orf47-201ENST00000334490 RAB27AP51159 221 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 PDK1Q15118 436 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 ZNF280DQ6N043 979 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 TATDN1Q6P1N9 297 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 GPR142Q7Z601 462 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 RASSF3Q86WH2 238 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 WDR75Q8IWA0 830 aaKnown RBP15.74■□□□□ 0.11
C9orf47-201ENST00000334490 THAP2Q9H0W7 228 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 AFF4Q9UHB7 1163 aaKnown RBP15.74■□□□□ 0.11
C9orf47-201ENST00000334490 MMEP08473 750 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 RAP1GAPP47736 663 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 SATB1Q01826 763 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 ELAVL2Q12926 359 aaKnown RBP15.74■□□□□ 0.11
C9orf47-201ENST00000334490 EFHBQ8N7U6 833 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 TACO1Q9BSH4 297 aaKnown RBP15.74■□□□□ 0.11
C9orf47-201ENST00000334490 KANSL3Q9P2N6 904 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 TIMM13Q9Y5L4 95 aaPredicted RBP15.74■□□□□ 0.11
C9orf47-201ENST00000334490 CFAP69A5D8W1 941 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 ASMTLO95671 621 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 CYP11B1P15538 503 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 RPL10AP62906 217 aaKnown RBP15.74■□□□□ 0.11
C9orf47-201ENST00000334490 MAP2K5Q13163 448 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 BYSLQ13895 437 aaKnown RBP15.74■□□□□ 0.11
C9orf47-201ENST00000334490 P3H1Q32P28 736 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 CELF3Q5SZQ8 465 aaKnown RBP15.74■□□□□ 0.11
C9orf47-201ENST00000334490 EPM2AIP1Q7L775 607 aaPredicted RBP15.74■□□□□ 0.11
C9orf47-201ENST00000334490 ANKMY2Q8IV38 441 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 KIAA0895Q8NCT3 520 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 ARHGEF26Q96DR7 871 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 ATXN7L3BQ96GX2 97 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 LRRC1Q9BTT6 524 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 WDCPQ9H6R7 721 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 DSEQ9UL01 958 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 LHX1P48742 406 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 TWF1Q12792 350 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 NFE2Q16621 373 aaPredicted RBP15.74■□□□□ 0.11
C9orf47-201ENST00000334490 TMEM119Q4V9L6 283 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 WNK4Q96J92 1243 aa15.74■□□□□ 0.11
C9orf47-201ENST00000334490 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.74■□□□□ 0.11
C9orf47-201ENST00000334490 CTIFO43310 598 aaKnown RBP15.73■□□□□ 0.11
C9orf47-201ENST00000334490 TTC4O95801 387 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 ZNF507Q8TCN5 953 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 RPRD1AQ96P16 312 aaPredicted RBP15.73■□□□□ 0.11
C9orf47-201ENST00000334490 SLC13A1Q9BZW2 595 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.73■□□□□ 0.11
C9orf47-201ENST00000334490 PCDHB8Q9UN66 801 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 HOXC6P09630 235 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 SLC2A3P11169 496 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 BCAT1P54687 386 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 MKRN4PQ13434 485 aaPredicted RBP15.73■□□□□ 0.11
C9orf47-201ENST00000334490 ZPBP2Q6X784 338 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 ZNF410Q86VK4 478 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 FGD4Q96M96 766 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 PITPNM3Q9BZ71 974 aa15.73■□□□□ 0.11
C9orf47-201ENST00000334490 PCDHB12Q9Y5F1 795 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms