RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 POLR2BP30876 1174 aaKnown RBP12.48□□□□□ -0.41
HDAC6-201ENST00000334136 FMO5P49326 533 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 RBBP5Q15291 538 aaKnown RBP12.48□□□□□ -0.41
HDAC6-201ENST00000334136 TTI2Q6NXR4 508 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 MAP4K3Q8IVH8 894 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 TMEM161BQ8NDZ6 487 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 PRG3Q9Y2Y8 225 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-201ENST00000334136 LAMB1P07942 1786 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 ZSCAN5CA6NGD5 496 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-201ENST00000334136 HOXA2O43364 376 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 RAD51CO43502 376 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 MCF2P10911 925 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 MDM2Q00987 491 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-201ENST00000334136 KCNA1Q09470 495 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 PSMD6Q15008 389 aa12.48□□□□□ -0.41
HDAC6-201ENST00000334136 UBQLN1Q9UMX0 589 aaKnown RBP12.48□□□□□ -0.41
HDAC6-201ENST00000334136 LGR5O75473 907 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 TBXAS1P24557 533 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-201ENST00000334136 C6orf118Q5T5N4 469 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 PALM2Q8IXS6 379 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 SRRM1Q8IYB3 904 aaKnown RBP12.47□□□□□ -0.41
HDAC6-201ENST00000334136 ARHGAP24Q8N264 748 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 MAK16Q9BXY0 300 aaKnown RBP12.47□□□□□ -0.41
HDAC6-201ENST00000334136 SNTG2Q9NY99 539 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 RAB21Q9UL25 225 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 KLRC4O43908 158 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 LUC7L3O95232 432 aaKnown RBP12.47□□□□□ -0.41
HDAC6-201ENST00000334136 NSFP46459 744 aaKnown RBP12.47□□□□□ -0.41
HDAC6-201ENST00000334136 CASP5P51878 434 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 NT5DC1Q5TFE4 455 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 PDXDC1Q6P996 788 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 TMEM270Q6UE05 265 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 GLYCTKQ8IVS8 523 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 CD302Q8IX05 232 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 KIAA0319LQ8IZA0 1049 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 TMEM199Q8N511 208 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 CCDC89Q8N998 374 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 GLIS3Q8NEA6 775 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 CCDC110Q8TBZ0 833 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 MDM1Q8TC05 714 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 MIS12Q9H081 205 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 FLRT1Q9NZU1 646 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 DLEC1Q9Y238 1755 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 OPHN1O60890 802 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 RAB27AP51159 221 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 GTF2BQ00403 316 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 IKBKEQ14164 716 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 RCN2Q14257 317 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 MYBPC2Q14324 1141 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 PAN2Q504Q3 1202 aaKnown RBP12.47□□□□□ -0.41
HDAC6-201ENST00000334136 CYFIP2Q96F07 1278 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 TRIM51Q9BSJ1 452 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 DDX23Q9BUQ8 820 aaKnown RBP12.47□□□□□ -0.41
HDAC6-201ENST00000334136 PITPNM3Q9BZ71 974 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 GJD2Q9UKL4 321 aa12.47□□□□□ -0.41
HDAC6-201ENST00000334136 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-201ENST00000334136 MED7O43513 233 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 EVI5O60447 810 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 CA4P22748 312 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 CD52P31358 61 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 PURAQ00577 322 aaKnown RBP12.46□□□□□ -0.41
HDAC6-201ENST00000334136 TSPY1Q01534 308 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 TBX2Q13207 712 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-201ENST00000334136 SGSM1Q2NKQ1 1148 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 ARHGEF18Q6ZSZ5 1173 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 RAB3IL1Q8TBN0 382 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 YME1L1Q96TA2 773 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.46□□□□□ -0.416e-7■■□□□ 14.2
HDAC6-201ENST00000334136 TRPV6Q9H1D0 765 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 TRMT13Q9NUP7 481 aaKnown RBP12.46□□□□□ -0.41
HDAC6-201ENST00000334136 RAB20Q9NX57 234 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 WRAP73Q9P2S5 460 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-201ENST00000334136 ANAPC5Q9UJX4 755 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 ST3GAL5Q9UNP4 418 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 I3L4J1 428 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 MAP2K7O14733 419 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 HLA-DRAP01903 254 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 CXCL8P10145 99 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 ERFP50548 548 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 LAMA4Q16363 1823 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 CDK5RAP2Q96SN8 1893 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 KIAA1551Q9HCM1 1747 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 TMEM8AQ9HCN3 771 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 TRAF3IP3Q9Y228 551 aa12.46□□□□□ -0.41
HDAC6-201ENST00000334136 MYO9BQ13459 2157 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 KIF13BQ9NQT8 1826 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 A8MXQ7 604 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 CAPN9O14815 690 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 AKAP3O75969 853 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 F2P00734 622 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 THP07101 528 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 CYBAP13498 195 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 AKAP5P24588 427 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 ALDH7A1P49419 539 aaKnown RBP12.46□□□□□ -0.42
HDAC6-201ENST00000334136 PMS2P54278 862 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 TLE2Q04725 743 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 MTFR1Q15390 333 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 PHLDB3Q6NSJ2 640 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 TTC39CQ8N584 583 aa12.46□□□□□ -0.42
HDAC6-201ENST00000334136 ADAM33Q9BZ11 813 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms