RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 FAM155BO75949 473 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 F7P08709 466 aaPredicted RBP11.72□□□□□ -0.53
CCDC87-201ENST00000333861 ALAS1P13196 640 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 VAV1P15498 845 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 TAS2R40P59535 323 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 MPP3Q13368 585 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 ACAP1Q15027 740 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 R3HDM1Q15032 1099 aaKnown RBP11.72□□□□□ -0.53
CCDC87-201ENST00000333861 SPOPLQ6IQ16 392 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 CROCCP2Q86T23 111 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 SYT2Q8N9I0 419 aaPredicted RBP11.72□□□□□ -0.53
CCDC87-201ENST00000333861 NAT14Q8WUY8 206 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 C7orf43Q8WVR3 580 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 GRAMD1AQ96CP6 724 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 THTPAQ9BU02 230 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 LRRC27Q9C0I9 530 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 SMYD3Q9H7B4 428 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 PCDHGB4Q9UN71 923 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 ZNF510Q9Y2H8 683 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 PCDHGB5Q9Y5G0 923 aa11.72□□□□□ -0.53
CCDC87-201ENST00000333861 B2RBV5 119 aa11.71□□□□□ -0.53
CCDC87-201ENST00000333861 K7ENM7 598 aa11.71□□□□□ -0.53
CCDC87-201ENST00000333861 MEIS2O14770 477 aa11.71□□□□□ -0.53
CCDC87-201ENST00000333861 ZNF862O60290 1169 aa11.71□□□□□ -0.53
CCDC87-201ENST00000333861 ITGA2BP08514 1039 aa11.71□□□□□ -0.53
CCDC87-201ENST00000333861 ATP6V1B1P15313 513 aa11.71□□□□□ -0.53
CCDC87-201ENST00000333861 RPL13P26373 211 aaKnown RBP11.71□□□□□ -0.53
CCDC87-201ENST00000333861 GMPRP36959 345 aa11.71□□□□□ -0.53
CCDC87-201ENST00000333861 MAGEA4P43358 317 aa11.71□□□□□ -0.53
CCDC87-201ENST00000333861 CDC16Q13042 620 aa11.71□□□□□ -0.53
CCDC87-201ENST00000333861 NR1H3Q13133 447 aa11.71□□□□□ -0.53
CCDC87-201ENST00000333861 PPP6R3Q5H9R7 873 aaPredicted RBP11.71□□□□□ -0.53
CCDC87-201ENST00000333861 MAML1Q92585 1016 aa11.71□□□□□ -0.53
CCDC87-201ENST00000333861 TRIM56Q9BRZ2 755 aaKnown RBP11.71□□□□□ -0.53
CCDC87-201ENST00000333861 SYT11Q9BT88 431 aa11.71□□□□□ -0.53
CCDC87-201ENST00000333861 ARHGEF38Q9NXL2 777 aa11.71□□□□□ -0.53
CCDC87-201ENST00000333861 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.71□□□□□ -0.53
CCDC87-201ENST00000333861 BOLA2-SMG1P6H3BVE0 249 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 ZBTB5O15062 677 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 BBOX1O75936 387 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 MAPK4P31152 587 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 MAGEA8P43361 318 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 CDK7P50613 346 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 Q4G0T1 1027 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 ARHGAP27Q6ZUM4 889 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 MARK2Q7KZI7 788 aaKnown RBP11.71□□□□□ -0.54
CCDC87-201ENST00000333861 TRABD2AQ86V40 505 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 CBWD2Q8IUF1 395 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 CCDC33Q8N5R6 958 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 CCDC124Q96CT7 223 aaKnown RBP11.71□□□□□ -0.54
CCDC87-201ENST00000333861 CLMNQ96JQ2 1002 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 ECSITQ9BQ95 431 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 CENPKQ9BS16 269 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 ACSS2Q9NR19 701 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 STX18Q9P2W9 335 aaKnown RBP11.71□□□□□ -0.54
CCDC87-201ENST00000333861 GGA1Q9UJY5 639 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.71□□□□□ -0.54
CCDC87-201ENST00000333861 ADGRA3Q8IWK6 1321 aa11.71□□□□□ -0.54
CCDC87-201ENST00000333861 LMNAP02545 664 aaKnown RBP11.7□□□□□ -0.54
CCDC87-201ENST00000333861 ASLP04424 464 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 ANPEPP15144 967 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 NPR1P16066 1061 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 DESP17661 470 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 RHBDL3P58872 404 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 FMO1Q01740 532 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 DSG1Q02413 1049 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 PPP2R5EQ16537 467 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 TXNRD3NBQ6F5E7 133 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 RHBDF2Q6PJF5 856 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 RIPOR1Q6ZS17 1223 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 CYFIP1Q7L576 1253 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 TMEM130Q8N3G9 435 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 SNF8Q96H20 258 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 LZTS2Q9BRK4 669 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 C11orf70Q9BRQ4 267 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 RMI1Q9H9A7 625 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 POLLQ9UGP5 575 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 BGNP21810 368 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 HOXA10P31260 410 aaPredicted RBP11.7□□□□□ -0.54
CCDC87-201ENST00000333861 CLK2P49760 499 aaKnown RBP11.7□□□□□ -0.54
CCDC87-201ENST00000333861 SP4Q02446 784 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 DLG1Q12959 904 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 GPS1Q13098 491 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 NCOA4Q13772 614 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 TFDP1Q14186 410 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 SEPT7Q16181 437 aaKnown RBP11.7□□□□□ -0.54
CCDC87-201ENST00000333861 CMPK2Q5EBM0 449 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 ETNPPLQ8TBG4 499 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 EPS8L1Q8TE68 723 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 DTNBP1Q96EV8 351 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 NSL1Q96IY1 281 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 FAM192AQ9GZU8 254 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 MROH7Q68CQ1 1323 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 KDM3AQ9Y4C1 1321 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 A0A0J9YVX5 310 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 SETSIPP0DME0 302 aa11.7□□□□□ -0.54
CCDC87-201ENST00000333861 MSX2P35548 267 aaPredicted RBP11.7□□□□□ -0.54
CCDC87-201ENST00000333861 PLOD1Q02809 727 aaPredicted RBP11.7□□□□□ -0.54
CCDC87-201ENST00000333861 PDIA2Q13087 525 aaKnown RBP11.7□□□□□ -0.54
CCDC87-201ENST00000333861 PDK4Q16654 411 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms