RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 NR2E1Q9Y466 385 aa10.5□□□□□ -0.73
SYN3-201ENST00000332840 NUB1Q9Y5A7 615 aa10.5□□□□□ -0.73
SYN3-201ENST00000332840 STYXL1Q9Y6J8 313 aa10.5□□□□□ -0.73
SYN3-201ENST00000332840 TTC26A0AVF1 554 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 ARHGEF37A1IGU5 675 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 F8W810 466 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 PODXLO00592 558 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 SYN3O14994 580 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 LDHAP00338 332 aaKnown RBP10.49□□□□□ -0.73
SYN3-201ENST00000332840 CXCL8P10145 99 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 EPCAMP16422 314 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 FGFR3P22607 806 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 PSMC2P35998 433 aaKnown RBP10.49□□□□□ -0.73
SYN3-201ENST00000332840 CLCNKBP51801 687 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 RBM10P98175 930 aaKnown RBP10.49□□□□□ -0.73
SYN3-201ENST00000332840 PSMD5Q16401 504 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 SLC10A6Q3KNW5 377 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 CEP135Q66GS9 1140 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 CEP57Q86XR8 500 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 C12orf56Q8IXR9 622 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 TC2NQ8N9U0 490 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 HASPINQ8TF76 798 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 TMEM174Q8WUU8 243 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 SPOCK2Q92563 424 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 PCMTD1Q96MG8 357 aaPredicted RBP10.49□□□□□ -0.73
SYN3-201ENST00000332840 PANX2Q96RD6 677 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 PAAF1Q9BRP4 392 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 ASB7Q9H672 318 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 RRAGDQ9NQL2 400 aaPredicted RBP10.49□□□□□ -0.73
SYN3-201ENST00000332840 AGPAT3Q9NRZ7 376 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 ZDHHC7Q9NXF8 308 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 MUTYHQ9UIF7 546 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 AGO2Q9UKV8 859 aaKnown RBP10.49□□□□□ -0.73
SYN3-201ENST00000332840 FRMD4BQ9Y2L6 1034 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 DERAQ9Y315 318 aa10.49□□□□□ -0.73
SYN3-201ENST00000332840 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.49□□□□□ -0.73
SYN3-201ENST00000332840 FAM189A1O60320 539 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 STX10O60499 249 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 MFAP3LO75121 409 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 IL18RAPO95256 599 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 GYPCP04921 128 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 ADRB2P07550 413 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 GARTP22102 1010 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 LRPAP1P30533 357 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 CASP14P31944 242 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 CLCN1P35523 988 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 ADKP55263 362 aaKnown RBP10.48□□□□□ -0.73
SYN3-201ENST00000332840 SYCP1Q15431 976 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 ENOX2Q16206 610 aaKnown RBP10.48□□□□□ -0.73
SYN3-201ENST00000332840 FIGNQ5HY92 759 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 RTP2Q5QGT7 225 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 RARS2Q5T160 578 aaKnown RBP10.48□□□□□ -0.73
SYN3-201ENST00000332840 LIN9Q5TKA1 542 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 TAS1R1Q7RTX1 841 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 GPR149Q86SP6 731 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 NT5DC4Q86YG4 428 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 FAM186BQ8IYM0 893 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 APPL2Q8NEU8 664 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 BEST2Q8NFU1 509 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 CPLX3Q8WVH0 158 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 POMGNT1Q8WZA1 660 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 ZMAT2Q96NC0 199 aaKnown RBP10.48□□□□□ -0.73
SYN3-201ENST00000332840 NAA15Q9BXJ9 866 aaKnown RBP10.48□□□□□ -0.73
SYN3-201ENST00000332840 OXCT2Q9BYC2 517 aaPredicted RBP10.48□□□□□ -0.73
SYN3-201ENST00000332840 MAN1C1Q9NR34 630 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 CPSF3Q9UKF6 684 aaKnown RBP10.48□□□□□ -0.73
SYN3-201ENST00000332840 CAPN11Q9UMQ6 739 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 USTQ9Y2C2 406 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 C2CD2Q9Y426 696 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 BACE2Q9Y5Z0 518 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 VPS13AQ96RL7 3174 aa10.48□□□□□ -0.73
SYN3-201ENST00000332840 PTPRZ1P23471 2315 aaPredicted RBP10.47□□□□□ -0.73
SYN3-201ENST00000332840 LOC730098B7Z3J9 87 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 H7C4K7 107 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 MAPK13O15264 365 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 ARHGAP6O43182 974 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 EXOC3O60645 756 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 AKAP3O75969 853 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 AFPP02771 609 aaKnown RBP10.47□□□□□ -0.73
SYN3-201ENST00000332840 HNRNPA1P09651 372 aaKnown RBP eCLIP10.47□□□□□ -0.73
SYN3-201ENST00000332840 TRIM21P19474 475 aaKnown RBP10.47□□□□□ -0.73
SYN3-201ENST00000332840 CASP4P49662 377 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 CYP2J2P51589 502 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 SOX4Q06945 474 aaPredicted RBP10.47□□□□□ -0.73
SYN3-201ENST00000332840 KCNH2Q12809 1159 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 TMEM132DQ14C87 1099 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 TSR1Q2NL82 804 aaKnown RBP10.47□□□□□ -0.73
SYN3-201ENST00000332840 SLC39A4Q6P5W5 647 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 CCDC149Q6ZUS6 474 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 ZNF397Q8NF99 534 aaPredicted RBP10.47□□□□□ -0.73
SYN3-201ENST00000332840 LNX1Q8TBB1 728 aaPredicted RBP10.47□□□□□ -0.73
SYN3-201ENST00000332840 RABGGTAQ92696 567 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 ACSF2Q96CM8 615 aaPredicted RBP10.47□□□□□ -0.73
SYN3-201ENST00000332840 BAG1Q99933 345 aaPredicted RBP10.47□□□□□ -0.73
SYN3-201ENST00000332840 EDEM3Q9BZQ6 932 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 HAPLN2Q9GZV7 340 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 GOLGA2P5Q9HBQ8 144 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 MTRRQ9UBK8 725 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 MAFFQ9ULX9 164 aa10.47□□□□□ -0.73
SYN3-201ENST00000332840 SIK3Q9Y2K2 1263 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms