RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 IRF2BP2Q7Z5L9 587 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 DBF4BQ8NFT6 615 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 FZD8Q9H461 694 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 MED4Q9NPJ6 270 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 PRKAG2Q9UGJ0 569 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 HMGXB4Q9UGU5 601 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 GTF2IRD1Q9UHL9 959 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 CAPN7Q9Y6W3 813 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 ESYT3A0FGR9 886 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 CAPN9O14815 690 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 ATP2C2O75185 946 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 IFNB1P01574 187 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 MYBL2P10244 700 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 BRCC3P46736 316 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 CCDC25Q86WR0 208 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 SLC9A9Q8IVB4 645 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 SELENOOQ9BVL4 669 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 RAB21Q9UL25 225 aa16.85■□□□□ 0.29
PDGFB-201ENST00000331163 HOXC6P09630 235 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 C1orf220Q5T0J3 134 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 GLB1LQ6UWU2 654 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 FAM228AQ86W67 206 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 CPNE8Q86YQ8 564 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 STKLD1Q8NE28 680 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 ZNF564Q8TBZ8 553 aaPredicted RBP16.84■□□□□ 0.29
PDGFB-201ENST00000331163 SIX2Q9NPC8 291 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 MROH7Q68CQ1 1323 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 GON4LQ3T8J9 2241 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 F5H423 210 aaPredicted RBP16.84■□□□□ 0.29
PDGFB-201ENST00000331163 GPR182O15218 404 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 XPOTO43592 962 aaKnown RBP16.84■□□□□ 0.29
PDGFB-201ENST00000331163 THP07101 528 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 SLC8A3P57103 927 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 RTP1P59025 263 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 B4GALNT4Q76KP1 1039 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 OTOP2Q7RTS6 562 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 WDR49Q8IV35 697 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 LNX1Q8TBB1 728 aaPredicted RBP16.84■□□□□ 0.29
PDGFB-201ENST00000331163 MFSD14AQ96MC6 490 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 DPH5Q9H2P9 285 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 FAM105AQ9NUU6 356 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 NUDT5Q9UKK9 219 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 MYH15Q9Y2K3 1946 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 DCDC2CA8MYV0 355 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 BUB1BO60566 1050 aaPredicted RBP16.84■□□□□ 0.29
PDGFB-201ENST00000331163 KIAA0754O94854 1291 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 VNN1O95497 513 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 SYF2O95926 243 aaKnown RBP16.84■□□□□ 0.29
PDGFB-201ENST00000331163 SYN1P17600 705 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 ABCD1P33897 745 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 BPIFB4P59827 614 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 COBLL1Q53SF7 1204 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 FAM102AQ5T9C2 384 aaPredicted RBP16.84■□□□□ 0.29
PDGFB-201ENST00000331163 GSTA5Q7RTV2 222 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 APPL2Q8NEU8 664 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 EPS8L1Q8TE68 723 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 ZNF606Q8WXB4 792 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 PAWRQ96IZ0 340 aaKnown RBP16.84■□□□□ 0.29
PDGFB-201ENST00000331163 MCEEQ96PE7 176 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 CALN1Q9BXU9 219 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 TTYH3Q9C0H2 523 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 CPSF3Q9UKF6 684 aaKnown RBP16.84■□□□□ 0.29
PDGFB-201ENST00000331163 TTLL3Q9Y4R7 772 aa16.84■□□□□ 0.29
PDGFB-201ENST00000331163 SMIM35A0A1B0GVV1 85 aa16.83■□□□□ 0.29
PDGFB-201ENST00000331163 MCF2P10911 925 aa16.83■□□□□ 0.29
PDGFB-201ENST00000331163 GATMP50440 423 aa16.83■□□□□ 0.29
PDGFB-201ENST00000331163 PPP6R3Q5H9R7 873 aaPredicted RBP16.83■□□□□ 0.29
PDGFB-201ENST00000331163 SYCP2LQ5T4T6 812 aa16.83■□□□□ 0.29
PDGFB-201ENST00000331163 TSHZ1Q6ZSZ6 1077 aa16.83■□□□□ 0.29
PDGFB-201ENST00000331163 ZMAT2Q96NC0 199 aaKnown RBP16.83■□□□□ 0.29
PDGFB-201ENST00000331163 KRT12Q99456 494 aa16.83■□□□□ 0.29
PDGFB-201ENST00000331163 HPCAL4Q9UM19 191 aa16.83■□□□□ 0.29
PDGFB-201ENST00000331163 MAGED2Q9UNF1 606 aaPredicted RBP16.83■□□□□ 0.29
PDGFB-201ENST00000331163 A0A1W2PQJ5 194 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 CLDN5O00501 218 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 NDUFAB1O14561 156 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 CCL5P13501 91 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 CCDC130P13994 396 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 TLE2Q04725 743 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 PDCLQ13371 301 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 KCNT1Q5JUK3 1230 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 HGSNATQ68CP4 663 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 AADACL2Q6P093 401 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 ZNF410Q86VK4 478 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 MICAL1Q8TDZ2 1067 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 HSPH1Q92598 858 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 IQCDQ96DY2 449 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 PAAF1Q9BRP4 392 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 GREB1LQ9C091 1923 aaPredicted RBP16.83■□□□□ 0.28
PDGFB-201ENST00000331163 PSME4Q14997 1843 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 A0A087WUV0 522 aaPredicted RBP16.83■□□□□ 0.28
PDGFB-201ENST00000331163 SMIM28A0A1B0GU29 152 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 CYB561D2O14569 222 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 B4GALT4O60513 344 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 GNL1P36915 607 aaPredicted RBP16.83■□□□□ 0.28
PDGFB-201ENST00000331163 GPC5P78333 572 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 NDRG1Q92597 394 aaKnown RBP16.83■□□□□ 0.28
PDGFB-201ENST00000331163 PCDHB18PQ96TA0 734 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 NCAPGQ9BPX3 1015 aa16.83■□□□□ 0.28
PDGFB-201ENST00000331163 GTF3C4Q9UKN8 822 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms