RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 PDLIM1O00151 329 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 UBTFL6P0CB48 400 aaPredicted RBP19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 MAPK6Q16659 721 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 ZC3H12AQ5D1E8 599 aaKnown RBP19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 PCNX4Q63HM2 1172 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 CEP128Q6ZU80 1094 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 ACER1Q8TDN7 264 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 NR1H4Q96RI1 486 aaPredicted RBP19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 FAM118BQ9BPY3 351 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 TUBB6Q9BUF5 446 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 FOXP3Q9BZS1 431 aa19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 UBE2OQ9C0C9 1292 aaKnown RBP19.12■□□□□ 0.65
CLSTN3-202ENST00000331148 CFAP69A5D8W1 941 aa19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 GCLMP48507 274 aa19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 WDR72Q3MJ13 1102 aa19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 GPC2Q8N158 579 aa19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 NSL1Q96IY1 281 aa19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 ANAPC7Q9UJX3 599 aa19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 WASF2Q9Y6W5 498 aa19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 ASNSP08243 561 aa19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 PLS3P13797 630 aa19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 CETN2P41208 172 aa19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 CNPY1Q3B7I2 92 aa19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 VPS52Q8N1B4 723 aa19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 ARHGAP18Q8N392 663 aa19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 TTC25Q96NG3 672 aa19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 HEMGNQ9BXL5 484 aa19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 DEFB129Q9H1M3 183 aa19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 MMADHCQ9H3L0 296 aaPredicted RBP19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 DDX43Q9NXZ2 648 aaKnown RBP19.11■□□□□ 0.65
CLSTN3-202ENST00000331148 DICER1Q9UPY3 1922 aaKnown RBP19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 A0A1W2PPM1 405 aa19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 P4HA2O15460 535 aa19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 LYNP07948 512 aa19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 ADSSP30520 456 aa19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 MAPK4P31152 587 aa19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 VAMP7P51809 220 aa19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 OVGP1Q12889 678 aa19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 IKQ13123 557 aaPredicted RBP19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 KLF1Q13351 362 aaPredicted RBP19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 P3H1Q32P28 736 aa19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 RINLQ6ZS11 566 aa19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 SYCP3Q8IZU3 236 aa19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 NCSTNQ92542 709 aa19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 KREMEN1Q96MU8 473 aa19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 HEY2Q9UBP5 337 aa19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 UMODL1Q5DID0 1318 aa19.1■□□□□ 0.65
CLSTN3-202ENST00000331148 ZBTB39O15060 712 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 CYP1A1P04798 512 aaPredicted RBP19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 KLRC2P26717 231 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 NEK3P51956 506 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 ODR4Q5SWX8 454 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 ANKS1BQ7Z6G8 1248 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 SCYL3Q8IZE3 742 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 KCTD17Q8N5Z5 321 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 DDX27Q96GQ7 796 aaKnown RBP19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 MAK16Q9BXY0 300 aaKnown RBP19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 GPRC5DQ9NZD1 345 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 A0A0G2JND7 137 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 PIK3CDO00329 1044 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 RALAP11233 206 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 SREBF1P36956 1147 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 FASTKD3Q14CZ7 662 aaKnown RBP19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 CCNG2Q16589 344 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 SYDE2Q5VT97 1194 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 DAB2IPQ5VWQ8 1189 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 SDCCAG8Q86SQ7 713 aaPredicted RBP19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 TPH2Q8IWU9 490 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 NDNQ99608 321 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 HSD17B14Q9BPX1 270 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 DDX50Q9BQ39 737 aaKnown RBP19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 SYT17Q9BSW7 474 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 LMCD1Q9NZU5 365 aa19.09■□□□□ 0.65
CLSTN3-202ENST00000331148 CYP11B1P15538 503 aa19.08■□□□□ 0.65
CLSTN3-202ENST00000331148 ADRA1DP25100 572 aa19.08■□□□□ 0.65
CLSTN3-202ENST00000331148 THOC5Q13769 683 aaKnown RBP19.08■□□□□ 0.65
CLSTN3-202ENST00000331148 C1orf220Q5T0J3 134 aa19.08■□□□□ 0.65
CLSTN3-202ENST00000331148 CYP2W1Q8TAV3 490 aa19.08■□□□□ 0.65
CLSTN3-202ENST00000331148 PRR11Q96HE9 360 aaPredicted RBP19.08■□□□□ 0.65
CLSTN3-202ENST00000331148 SPATA16Q9BXB7 569 aa19.08■□□□□ 0.65
CLSTN3-202ENST00000331148 PCIF1Q9H4Z3 704 aa19.08■□□□□ 0.65
CLSTN3-202ENST00000331148 VPS37BQ9H9H4 285 aa19.08■□□□□ 0.65
CLSTN3-202ENST00000331148 LARSQ9P2J5 1176 aaKnown RBP19.08■□□□□ 0.65
CLSTN3-202ENST00000331148 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.08■□□□□ 0.65
CLSTN3-202ENST00000331148 CREB3O43889 395 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 DNAJC6O75061 913 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 ZCCHC18P0CG32 403 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 MCL1Q07820 350 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 MYBPC2Q14324 1141 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 RASIP1Q5U651 963 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 ACAD10Q6JQN1 1059 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 CAPN12Q6ZSI9 719 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 PDCD7Q8N8D1 485 aaKnown RBP19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 SKA1Q96BD8 255 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 MRRFQ96E11 262 aaKnown RBP19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 DYDC2Q96IM9 177 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 CCDC28BQ9BUN5 200 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 ADAM33Q9BZ11 813 aa19.08■□□□□ 0.64
CLSTN3-202ENST00000331148 ASCC2Q9H1I8 757 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms