RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 PALMDQ9NP74 551 aa8.83□□□□□ -1
SKA2-201ENST00000330137 ARHGEF4Q9NR80 690 aa8.83□□□□□ -1
SKA2-201ENST00000330137 C6orf203Q9P0P8 240 aaPredicted RBP8.83□□□□□ -1
SKA2-201ENST00000330137 APEX2Q9UBZ4 518 aa8.83□□□□□ -1
SKA2-201ENST00000330137 DNAJC12Q9UKB3 198 aa8.83□□□□□ -1
SKA2-201ENST00000330137 MAST2Q6P0Q8 1798 aa8.83□□□□□ -1
SKA2-201ENST00000330137 USP17L12C9JPN9 530 aa8.82□□□□□ -1
SKA2-201ENST00000330137 USP17L21D6R901 530 aa8.82□□□□□ -1
SKA2-201ENST00000330137 FCHO1O14526 889 aa8.82□□□□□ -1
SKA2-201ENST00000330137 ATP2A1O14983 1001 aa8.82□□□□□ -1
SKA2-201ENST00000330137 EIF3DO15371 548 aaKnown RBP eCLIP8.82□□□□□ -1
SKA2-201ENST00000330137 P4HA2O15460 535 aa8.82□□□□□ -1
SKA2-201ENST00000330137 CYTH3O43739 400 aa8.82□□□□□ -1
SKA2-201ENST00000330137 TBC1D12O60347 775 aa8.82□□□□□ -1
SKA2-201ENST00000330137 PLA2G4BP0C869 781 aa8.82□□□□□ -1
SKA2-201ENST00000330137 S100A1P23297 94 aa8.82□□□□□ -1
SKA2-201ENST00000330137 ACAT1P24752 427 aaKnown RBP8.82□□□□□ -1
SKA2-201ENST00000330137 KRT81Q14533 505 aa8.82□□□□□ -1
SKA2-201ENST00000330137 EFHC1Q5JVL4 640 aa8.82□□□□□ -1
SKA2-201ENST00000330137 C1orf146Q5VVC0 180 aa8.82□□□□□ -1
SKA2-201ENST00000330137 APBB2Q92870 758 aa8.82□□□□□ -1
SKA2-201ENST00000330137 SNX27Q96L92 541 aa8.82□□□□□ -1
SKA2-201ENST00000330137 LRGUKQ96M69 825 aa8.82□□□□□ -1
SKA2-201ENST00000330137 HAUS8Q9BT25 410 aa8.82□□□□□ -1
SKA2-201ENST00000330137 LRRC4BQ9NT99 713 aa8.82□□□□□ -1
SKA2-201ENST00000330137 SLC7A8Q9UHI5 535 aa8.82□□□□□ -1
SKA2-201ENST00000330137 GSTTP1A0A1W2PQM5 241 aa8.82□□□□□ -1
SKA2-201ENST00000330137 CLASP2O75122 1294 aaKnown RBP8.82□□□□□ -1
SKA2-201ENST00000330137 NR3C1P04150 777 aa8.82□□□□□ -1
SKA2-201ENST00000330137 STIP1P31948 543 aaKnown RBP8.82□□□□□ -1
SKA2-201ENST00000330137 PSMC2P35998 433 aaKnown RBP8.82□□□□□ -1
SKA2-201ENST00000330137 BTKQ06187 659 aa8.82□□□□□ -1
SKA2-201ENST00000330137 MSLNQ13421 630 aaPredicted RBP8.82□□□□□ -1
SKA2-201ENST00000330137 MYBPC2Q14324 1141 aa8.82□□□□□ -1
SKA2-201ENST00000330137 MAPK6Q16659 721 aa8.82□□□□□ -1
SKA2-201ENST00000330137 OGFRL1Q5TC84 451 aaPredicted RBP8.82□□□□□ -1
SKA2-201ENST00000330137 LRRC8BQ6P9F7 803 aa8.82□□□□□ -1
SKA2-201ENST00000330137 DRICH1Q6PGQ1 229 aaPredicted RBP8.82□□□□□ -1
SKA2-201ENST00000330137 TRIM67Q6ZTA4 783 aa8.82□□□□□ -1
SKA2-201ENST00000330137 KCNK18Q7Z418 384 aa8.82□□□□□ -1
SKA2-201ENST00000330137 ZNF410Q86VK4 478 aa8.82□□□□□ -1
SKA2-201ENST00000330137 RFWD2Q8NHY2 731 aa8.82□□□□□ -1
SKA2-201ENST00000330137 ZFP28Q8NHY6 868 aa8.82□□□□□ -1
SKA2-201ENST00000330137 ZNF526Q8TF50 670 aaPredicted RBP8.82□□□□□ -1
SKA2-201ENST00000330137 COX4I2Q96KJ9 171 aa8.82□□□□□ -1
SKA2-201ENST00000330137 C7orf26Q96N11 449 aa8.82□□□□□ -1
SKA2-201ENST00000330137 RBM15Q96T37 977 aaKnown RBP eCLIP8.82□□□□□ -1
SKA2-201ENST00000330137 CCT7Q99832 543 aa8.82□□□□□ -1
SKA2-201ENST00000330137 DHRS4Q9BTZ2 278 aa8.82□□□□□ -1
SKA2-201ENST00000330137 SENP6Q9GZR1 1112 aaPredicted RBP8.82□□□□□ -1
SKA2-201ENST00000330137 WWP1Q9H0M0 922 aa8.82□□□□□ -1
SKA2-201ENST00000330137 INIPQ9NRY2 104 aa8.82□□□□□ -1
SKA2-201ENST00000330137 AJAP1Q9UKB5 411 aaPredicted RBP8.82□□□□□ -1
SKA2-201ENST00000330137 CROTQ9UKG9 612 aa8.82□□□□□ -1
SKA2-201ENST00000330137 GTF3C4Q9UKN8 822 aa8.82□□□□□ -1
SKA2-201ENST00000330137 SOX13Q9UN79 622 aa8.82□□□□□ -1
SKA2-201ENST00000330137 NUMBLQ9Y6R0 609 aa8.82□□□□□ -1
SKA2-201ENST00000330137 SCN7AQ01118 1682 aa8.82□□□□□ -1
SKA2-201ENST00000330137 ALOX15BO15296 676 aa8.81□□□□□ -1
SKA2-201ENST00000330137 SPOPO43791 374 aa8.81□□□□□ -1
SKA2-201ENST00000330137 AKAP3O75969 853 aa8.81□□□□□ -1
SKA2-201ENST00000330137 FTLP02792 175 aaPredicted RBP8.81□□□□□ -1
SKA2-201ENST00000330137 PHBP35232 272 aa8.81□□□□□ -1
SKA2-201ENST00000330137 PPARGP37231 505 aaPredicted RBP8.81□□□□□ -1
SKA2-201ENST00000330137 CDK9P50750 372 aaKnown RBP8.81□□□□□ -1
SKA2-201ENST00000330137 FOLH1Q04609 750 aa8.81□□□□□ -1
SKA2-201ENST00000330137 SNAPC2Q13487 334 aa8.81□□□□□ -1
SKA2-201ENST00000330137 HIC1Q14526 733 aa8.81□□□□□ -1
SKA2-201ENST00000330137 SLC15A2Q16348 729 aa8.81□□□□□ -1
SKA2-201ENST00000330137 KLHL38Q2WGJ6 581 aa8.81□□□□□ -1
SKA2-201ENST00000330137 NADK2Q4G0N4 442 aa8.81□□□□□ -1
SKA2-201ENST00000330137 ADGRD1Q6QNK2 874 aa8.81□□□□□ -1
SKA2-201ENST00000330137 RAPH1Q70E73 1250 aa8.81□□□□□ -1
SKA2-201ENST00000330137 ADGRA1Q86SQ6 560 aa8.81□□□□□ -1
SKA2-201ENST00000330137 SH3RF3Q8TEJ3 882 aaPredicted RBP8.81□□□□□ -1
SKA2-201ENST00000330137 PYROXD1Q8WU10 500 aa8.81□□□□□ -1
SKA2-201ENST00000330137 TMEM174Q8WUU8 243 aa8.81□□□□□ -1
SKA2-201ENST00000330137 TTC1Q99614 292 aa8.81□□□□□ -1
SKA2-201ENST00000330137 PPME1Q9Y570 386 aa8.81□□□□□ -1
SKA2-201ENST00000330137 A0A0G2JND7 137 aa8.81□□□□□ -1
SKA2-201ENST00000330137 H0YJX3 145 aa8.81□□□□□ -1
SKA2-201ENST00000330137 BAG2O95816 211 aa8.81□□□□□ -1
SKA2-201ENST00000330137 AOC1P19801 751 aa8.81□□□□□ -1
SKA2-201ENST00000330137 FDFT1P37268 417 aa8.81□□□□□ -1
SKA2-201ENST00000330137 IL6STP40189 918 aaPredicted RBP8.81□□□□□ -1
SKA2-201ENST00000330137 KCNJ1P48048 391 aa8.81□□□□□ -1
SKA2-201ENST00000330137 FMO5P49326 533 aa8.81□□□□□ -1
SKA2-201ENST00000330137 GALK1P51570 392 aa8.81□□□□□ -1
SKA2-201ENST00000330137 SLC12A3P55017 1021 aa8.81□□□□□ -1
SKA2-201ENST00000330137 RELAQ04206 551 aa8.81□□□□□ -1
SKA2-201ENST00000330137 PDAP1Q13442 181 aaKnown RBP8.81□□□□□ -1
SKA2-201ENST00000330137 MORF4L2Q15014 288 aa8.81□□□□□ -1
SKA2-201ENST00000330137 INAQ16352 499 aa8.81□□□□□ -1
SKA2-201ENST00000330137 PKN2Q16513 984 aaKnown RBP8.81□□□□□ -1
SKA2-201ENST00000330137 ZNF423Q2M1K9 1284 aa8.81□□□□□ -1
SKA2-201ENST00000330137 SFT2D3Q587I9 215 aa8.81□□□□□ -1
SKA2-201ENST00000330137 AADACL2Q6P093 401 aa8.81□□□□□ -1
SKA2-201ENST00000330137 BANPQ8N9N5 519 aa8.81□□□□□ -1
SKA2-201ENST00000330137 RBM15BQ8NDT2 890 aaKnown RBP8.81□□□□□ -1
SKA2-201ENST00000330137 DEPTORQ8TB45 409 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms