RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SLC18A3Q16572 532 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 TIGD5Q53EQ6 642 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 UNC93AQ86WB7 457 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 TNS4Q8IZW8 715 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 TMEM86AQ8N2M4 240 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 KIAA1524Q8TCG1 905 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 DDX1Q92499 740 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 SUSD3Q96L08 255 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 ELOVL4Q9GZR5 314 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 ACP6Q9NPH0 428 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 PRG3Q9Y2Y8 225 aaPredicted RBP10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 MKI67P46013 3256 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 ARHGEF37A1IGU5 675 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 CYP11A1P05108 521 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 CHRNB2P17787 502 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 SLC4A11Q8NBS3 891 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 LNX1Q8TBB1 728 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 TWNKQ96RR1 684 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 DESI2Q9BSY9 194 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 NT5C1AQ9BXI3 368 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 SNX25Q9H3E2 840 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 SPTLC3Q9NUV7 552 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 HCSTQ9UBK5 93 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 ADGRG1Q9Y653 693 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 F8W810 466 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 DDX3XO00571 662 aaKnown RBP eCLIP10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 NRP1O14786 923 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 IPO7O95373 1038 aaKnown RBP10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 ITGB1P05556 798 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 BRCC3P46736 316 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 FMO1Q01740 532 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 GFPT1Q06210 699 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 ZNF394Q53GI3 561 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 WSCD1Q658N2 575 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 FAM117BQ6P1L5 589 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 TMCO2Q7Z6W1 182 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 GLYCTKQ8IVS8 523 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 SLC30A5Q8TAD4 765 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 HASPINQ8TF76 798 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 TMEM176AQ96HP8 235 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 COLEC11Q9BWP8 271 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 DNAI2Q9GZS0 605 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 CWH43Q9H720 699 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 KCND1Q9NSA2 647 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 DSEQ9UL01 958 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 NENFQ9UMX5 172 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 PCDHB8Q9UN66 801 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 REXO2Q9Y3B8 237 aaKnown RBP10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 KIAA1671Q9BY89 1806 aa10.92□□□□□ -0.66
VIPAS39-201ENST00000327028 A0A087X0T9 212 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 GABRDO14764 452 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 THAP12O43422 761 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 CALCAP01258 141 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 GALTP07902 379 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 CCDC175P0C221 793 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 FAM228BP0C875 321 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 TYMPP19971 482 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 TNFAIP3P21580 790 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 KRT83P78385 493 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 SPA17Q15506 151 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 TAF3Q5VWG9 929 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 OSTM1Q86WC4 334 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 ACRBPQ8NEB7 543 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 OR6B3Q8NGW1 331 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 SLC9A7Q96T83 725 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 MTIF3Q9H2K0 278 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 MARCH5Q9NX47 278 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 ADAMTS1Q9UHI8 967 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 ADAM28Q9UKQ2 775 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 FAN1Q9Y2M0 1017 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 PPP2R2CQ9Y2T4 447 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 NME7Q9Y5B8 376 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 NR2E3Q9Y5X4 410 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 CARNS1A5YM72 827 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 A8MXQ7 604 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 I3L4J1 428 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 ZNF263O14978 683 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 TRAPPC3O43617 180 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 GJB5O95377 273 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 ALDH2P05091 517 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 MMEP08473 750 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 GNL1P36915 607 aaPredicted RBP10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 LHX1P48742 406 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 BCAR1P56945 870 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 HTRA4P83105 476 aaPredicted RBP10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 ORC1Q13415 861 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 PHOSPHO2Q8TCD6 241 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 YME1L1Q96TA2 773 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 CXXC1Q9P0U4 656 aaPredicted RBP10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 PUF60Q9UHX1 559 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 KIAA1257Q9ULG3 409 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 STXBP5LQ9Y2K9 1186 aa10.91□□□□□ -0.66
VIPAS39-201ENST00000327028 CCP110O43303 1012 aa10.9□□□□□ -0.66
VIPAS39-201ENST00000327028 TADA2AO75478 443 aa10.9□□□□□ -0.66
VIPAS39-201ENST00000327028 VDRP11473 427 aa10.9□□□□□ -0.66
VIPAS39-201ENST00000327028 CD19P15391 556 aa10.9□□□□□ -0.66
VIPAS39-201ENST00000327028 BRD2P25440 801 aaKnown RBP10.9□□□□□ -0.66
VIPAS39-201ENST00000327028 BTG3Q14201 252 aaPredicted RBP10.9□□□□□ -0.66
VIPAS39-201ENST00000327028 RASIP1Q5U651 963 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms