RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 CDK17Q00537 523 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 MTMR3Q13615 1198 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 ZSCAN26Q16670 478 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 LLGL2Q6P1M3 1020 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 SLC27A1Q6PCB7 646 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 CCNI2Q6ZMN8 369 aaPredicted RBP13.9□□□□□ -0.18
LIN28A-202ENST00000326279 SH2D3CQ8N5H7 860 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 FAM114A2Q9NRY5 505 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 PCDHB7Q9Y5E2 793 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 MAD1L1Q9Y6D9 718 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 SCINQ9Y6U3 715 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 TAF1LQ8IZX4 1826 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 LRP5O75197 1615 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 A6NJR5 290 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 CST3P01034 146 aaPredicted RBP13.9□□□□□ -0.18
LIN28A-202ENST00000326279 KRT14P02533 472 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 KRT3P12035 628 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 ICAM3P32942 547 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 GRIK1P39086 918 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 MTFR1Q15390 333 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 NOP9Q86U38 636 aaKnown RBP13.9□□□□□ -0.18
LIN28A-202ENST00000326279 PALM2Q8IXS6 379 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 C10orf67Q8IYJ2 551 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 ACO2Q99798 780 aaKnown RBP13.9□□□□□ -0.18
LIN28A-202ENST00000326279 NUDT5Q9UKK9 219 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 RPTORQ8N122 1335 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 LY75O60449 1722 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 GOLGA4Q13439 2230 aaKnown RBP13.9□□□□□ -0.18
LIN28A-202ENST00000326279 DAB2IPQ5VWQ8 1189 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 PAPD7Q5XG87 772 aaKnown RBP13.9□□□□□ -0.18
LIN28A-202ENST00000326279 RWDD4Q6NW29 188 aaKnown RBP13.9□□□□□ -0.18
LIN28A-202ENST00000326279 ATG4AQ8WYN0 398 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 SALL4Q9UJQ4 1053 aa13.9□□□□□ -0.18
LIN28A-202ENST00000326279 TBKBP1A7MCY6 615 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 CYB561D2O14569 222 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 CREB3O43889 395 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 ACO1P21399 889 aaKnown RBP13.89□□□□□ -0.19
LIN28A-202ENST00000326279 AADACL2Q6P093 401 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 OTOP2Q7RTS6 562 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 ZC3H18Q86VM9 953 aaKnown RBP13.89□□□□□ -0.19
LIN28A-202ENST00000326279 SEMA4DQ92854 862 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 NKIRAS1Q9NYS0 192 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 TXNDC16Q9P2K2 825 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 ADSSP30520 456 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 TSPY1Q01534 308 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 CDR2Q01850 454 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 MGAT5BQ3V5L5 792 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 KCNT1Q5JUK3 1230 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 EMBQ6PCB8 327 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 USP38Q8NB14 1042 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 C18orf8Q96DM3 657 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 NT5C1AQ9BXI3 368 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 CAPS2Q9BXY5 557 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 P4HA2O15460 535 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 ITKQ08881 620 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 CLUL1Q15846 466 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 TAPT1Q6NXT6 567 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 DARS2Q6PI48 645 aaKnown RBP13.89□□□□□ -0.19
LIN28A-202ENST00000326279 IRF2BP2Q7Z5L9 587 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 GRK7Q8WTQ7 553 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 HVCN1Q96D96 273 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 LBHD1Q9BQE6 289 aaPredicted RBP13.89□□□□□ -0.19
LIN28A-202ENST00000326279 SMYD3Q9H7B4 428 aa13.89□□□□□ -0.19
LIN28A-202ENST00000326279 GTPBP10A4D1E9 387 aaKnown RBP13.88□□□□□ -0.19
LIN28A-202ENST00000326279 ATP2A2P16615 1042 aaKnown RBP13.88□□□□□ -0.19
LIN28A-202ENST00000326279 SNX17Q15036 470 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 BBS9Q3SYG4 887 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 TDRD10Q5VZ19 366 aaKnown RBP13.88□□□□□ -0.19
LIN28A-202ENST00000326279 PALB2Q86YC2 1186 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 THEM5Q8N1Q8 247 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 RNF139Q8WU17 664 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 ZNF560Q96MR9 790 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 CGRRF1Q99675 332 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 STMN4Q9H169 189 aaPredicted RBP13.88□□□□□ -0.19
LIN28A-202ENST00000326279 ANKZF1Q9H8Y5 726 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 MLXIPLQ9NP71 852 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 UMODL1Q5DID0 1318 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 MAP7D3Q8IWC1 876 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 UNC93B1Q9H1C4 597 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 RNF39Q9H2S5 420 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 FAM169AQ9Y6X4 670 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 SMCHD1A6NHR9 2005 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 POLR2AP24928 1970 aaKnown RBP13.88□□□□□ -0.19
LIN28A-202ENST00000326279 CCDC85CA6NKD9 419 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 SLC4A1P02730 911 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 ALDH7A1P49419 539 aaKnown RBP13.88□□□□□ -0.19
LIN28A-202ENST00000326279 TAF6P49848 677 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 PDCLQ13371 301 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 RHOT1Q8IXI2 618 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 C12orf29Q8N999 325 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 YME1L1Q96TA2 773 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 PARVAQ9NVD7 372 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 FBXL5Q9UKA1 691 aa13.88□□□□□ -0.19
LIN28A-202ENST00000326279 UBQLN1Q9UMX0 589 aaKnown RBP13.88□□□□□ -0.19
LIN28A-202ENST00000326279 ATP8B1O43520 1251 aa13.87□□□□□ -0.19
LIN28A-202ENST00000326279 CALB1P05937 261 aa13.87□□□□□ -0.19
LIN28A-202ENST00000326279 NDST1P52848 882 aa13.87□□□□□ -0.19
LIN28A-202ENST00000326279 CDC42EP1Q00587 391 aa13.87□□□□□ -0.19
LIN28A-202ENST00000326279 C17orf99Q6UX52 265 aa13.87□□□□□ -0.19
LIN28A-202ENST00000326279 PGBD4Q96DM1 585 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms