RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 SGF29Q96ES7 293 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 VCPIP1Q96JH7 1222 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 SEC62Q99442 399 aaKnown RBP7.35□□□□□ -1.23
CSTF3-201ENST00000323959 BTBD3Q9Y2F9 522 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 MORC2Q9Y6X9 1032 aaPredicted RBP7.35□□□□□ -1.23
CSTF3-201ENST00000323959 ARID2Q68CP9 1835 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 LRBAP50851 2863 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 ATG7O95352 703 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 PDCP20941 246 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 ELF1P32519 619 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 MCM4P33991 863 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 PDGFRLQ15198 375 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 TEAD2Q15562 447 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 SKIDA1Q1XH10 827 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 EOGTQ5NDL2 527 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 ADGRF4Q8IZF3 695 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 TRIML1Q8N9V2 468 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 NCOA7Q8NI08 942 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 SHKBP1Q8TBC3 707 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 B3GALT6Q96L58 329 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 KRT23Q9C075 422 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 SLC9A2Q9UBY0 812 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 AKT3Q9Y243 479 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 LRRK1Q38SD2 2015 aa7.35□□□□□ -1.23
CSTF3-201ENST00000323959 ZBTB42B2RXF5 422 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 HNRNPRO43390 633 aaKnown RBP7.34□□□□□ -1.23
CSTF3-201ENST00000323959 DFNA5O60443 496 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 TADA2AO75478 443 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 CCT8P50990 548 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 PPARAQ07869 468 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 ST3GAL1Q11201 340 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 MORC3Q14149 939 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 TESK1Q15569 626 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 HLA-BQ31612 363 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 ATL3Q6DD88 541 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 TIPARPQ7Z3E1 657 aaKnown RBP7.34□□□□□ -1.23
CSTF3-201ENST00000323959 SLC41A1Q8IVJ1 513 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 IFNL3Q8IZI9 196 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 DNASE2BQ8WZ79 361 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 ZNF512Q96ME7 567 aaPredicted RBP7.34□□□□□ -1.23
CSTF3-201ENST00000323959 PPP1R16BQ96T49 567 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 MAP3K14Q99558 947 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 FAM83CQ9BQN1 747 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 RNF41Q9H4P4 317 aaPredicted RBP7.34□□□□□ -1.23
CSTF3-201ENST00000323959 SNTG2Q9NY99 539 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 BCCIPQ9P287 314 aaKnown RBP eCLIP7.34□□□□□ -1.23
CSTF3-201ENST00000323959 ATXN7L1Q9ULK2 861 aaPredicted RBP7.34□□□□□ -1.23
CSTF3-201ENST00000323959 TLN1Q9Y490 2541 aaKnown RBP7.34□□□□□ -1.23
CSTF3-201ENST00000323959 STK36Q9NRP7 1315 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 SPTBN1Q01082 2364 aaKnown RBP7.34□□□□□ -1.23
CSTF3-201ENST00000323959 MEIS3P2A8K0S8 358 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 ZNF217O75362 1048 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 POMCP01189 267 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 MCM5P33992 734 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 ACADVLP49748 655 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 HMGN5P82970 282 aaKnown RBP7.34□□□□□ -1.23
CSTF3-201ENST00000323959 USP53Q70EK8 1073 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 CPA6Q8N4T0 437 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 RLN3Q8WXF3 142 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 CHFRQ96EP1 664 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 HPS4Q9NQG7 708 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 GMIPQ9P107 970 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 CLCA2Q9UQC9 943 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 ZDHHC9Q9Y397 364 aa7.34□□□□□ -1.23
CSTF3-201ENST00000323959 ZNF213O14771 459 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 ADAM12O43184 909 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 NMT2O60551 498 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 GJB6O95452 261 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 HOXA13P31271 388 aaPredicted RBP7.33□□□□□ -1.24
CSTF3-201ENST00000323959 HSP90AA2PQ14568 343 aaPredicted RBP7.33□□□□□ -1.24
CSTF3-201ENST00000323959 ME3Q16798 604 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 CCDC157Q569K6 752 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 CAPRIN2Q6IMN6 1127 aaKnown RBP7.33□□□□□ -1.24
CSTF3-201ENST00000323959 TMTC2Q8N394 836 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 HSPA12BQ96MM6 686 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 CCNL2Q96S94 520 aaPredicted RBP7.33□□□□□ -1.24
CSTF3-201ENST00000323959 IL21RQ9HBE5 538 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 RTEL1Q9NZ71 1219 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 TJP2Q9UDY2 1190 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 PIN4Q9Y237 131 aaKnown RBP7.33□□□□□ -1.24
CSTF3-201ENST00000323959 E2F8A0AVK6 867 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 OR1D2P34982 312 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 DUSP3P51452 185 aaPredicted RBP7.33□□□□□ -1.24
CSTF3-201ENST00000323959 ACTR2P61160 394 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 PLD1Q13393 1074 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 CCDC178Q5BJE1 867 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 SLC7A3Q8WY07 619 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 ZFYVE19Q96K21 471 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 SCLT1Q96NL6 688 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 SLITRK6Q9H5Y7 841 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 KIF9Q9HAQ2 790 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 ATP6V1DQ9Y5K8 247 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 INSL5Q9Y5Q6 135 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 MED13LQ71F56 2210 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 COL12A1Q99715 3063 aa7.33□□□□□ -1.24
CSTF3-201ENST00000323959 GOLGA4Q13439 2230 aaKnown RBP7.32□□□□□ -1.24
CSTF3-201ENST00000323959 PRRG1O14668 218 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 DIAPH2O60879 1101 aa7.32□□□□□ -1.24
CSTF3-201ENST00000323959 LDOC1O95751 146 aaPredicted RBP7.32□□□□□ -1.24
CSTF3-201ENST00000323959 MYL4P12829 197 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms