RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 MYOZ2Q9NPC6 264 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 CASS4Q9NQ75 786 aa11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 STX18Q9P2W9 335 aaKnown RBP11.42□□□□□ -0.58
SNRNP200-201ENST00000323853 HNRNPCL2B2RXH8 293 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 AP5Z1O43299 807 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 CST8O60676 142 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 POLBP06746 335 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 KRT4P19013 534 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 KCNJ1P48048 391 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 UGP2Q16851 508 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 ACCSLQ4AC99 568 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 CMTM5Q96DZ9 223 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 TMA16Q96EY4 203 aaKnown RBP11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 MRPL1Q9BYD6 325 aaKnown RBP11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 MARCOQ9UEW3 520 aaPredicted RBP11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 TCRBV5S4A2TA0A5A2 114 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 RSPH10B2B2RC85 870 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 TRIM66O15016 1216 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 RSPH10BP0C881 870 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 LAMB3Q13751 1172 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 ITIH4Q14624 930 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 FIGNQ5HY92 759 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 CDKAL1Q5VV42 579 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 C1orf131Q8NDD1 294 aaKnown RBP11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 C17orf75Q9HAS0 396 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 KBTBD4Q9NVX7 518 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 TEKT2Q9UIF3 430 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 DNAJC6O75061 913 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 GFAPP14136 432 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 FGFR2P21802 821 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 NNMTP40261 264 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 SEC23AQ15436 765 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 NBPF20Q3BBV1 942 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 LRRC71Q8N4P6 559 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 MDM1Q8TC05 714 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 NAF1Q96HR8 494 aaKnown RBP11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 PACSIN1Q9BY11 444 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 TMEM39BQ9GZU3 492 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 GTF3C4Q9UKN8 822 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 SPRP35270 261 aaPredicted RBP11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 SEC24CP53992 1094 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 EN1Q05925 392 aaPredicted RBP11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 MAPK7Q13164 816 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 PRPF39Q86UA1 669 aaKnown RBP11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 ACTRT1Q8TDG2 376 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 FUT8Q9BYC5 575 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 CARD9Q9H257 536 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 TRIM45Q9H8W5 580 aaPredicted RBP11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 FAM49BQ9NUQ9 324 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 MOSPD1Q9UJG1 213 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 A0A0A6YYK5 440 aaPredicted RBP11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 SLC25A27O95847 323 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 H2AFXP16104 143 aaPredicted RBP11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 CTCFP49711 727 aaPredicted RBP11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 CHI3L2Q15782 390 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 GMCL1P1Q8NEA9 526 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 SLC7A14Q8TBB6 771 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 EPS8L3Q8TE67 593 aaKnown RBP11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 STAMBPL1Q96FJ0 436 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 PRMT7Q9NVM4 692 aaPredicted RBP11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 NAGPAQ9UK23 515 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 TECPR2O15040 1411 aa11.41□□□□□ -0.58
SNRNP200-201ENST00000323853 IGF2BP3O00425 579 aaKnown RBP eCLIP11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 NPTXRO95502 500 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 CNGA3Q16281 694 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 SCFD1Q8WVM8 642 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 ACSF2Q96CM8 615 aaPredicted RBP11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 E2F8A0AVK6 867 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 LRRIQ3A6PVS8 624 aaPredicted RBP11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 MEI1Q5TIA1 1274 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 POTEAQ6S8J7 498 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 ADGRA1Q86SQ6 560 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 NSL1Q96IY1 281 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 WHRNQ9P202 907 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 DUSP10Q9Y6W6 482 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 CORO7P57737 925 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 KIF2BQ8N4N8 673 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 GTF3C2Q8WUA4 911 aaPredicted RBP11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 TFB1MQ8WVM0 346 aaKnown RBP11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 E2F7Q96AV8 911 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 CATSPERBQ9H7T0 1116 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 SLC38A7Q9NVC3 462 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 PRPF4O43172 522 aaKnown RBP eCLIP11.4□□□□□ -0.581e-9■□□□□ 10.2
SNRNP200-201ENST00000323853 TCF7P36402 384 aaPredicted RBP11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 SNX17Q15036 470 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 PKN1Q16512 942 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 EFHC1Q5JVL4 640 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 KIRREL3Q8IZU9 778 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 MAGEB18Q96M61 343 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 KCNK16Q96T55 309 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 GRID1Q9ULK0 1009 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 CAPN6Q9Y6Q1 641 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 DPYSL4O14531 572 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 ATXN8OSP0DMR3 200 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 SREBF1P36956 1147 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 LRRC34Q8IZ02 419 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 ZNF507Q8TCN5 953 aa11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 KLF6Q99612 283 aaPredicted RBP11.4□□□□□ -0.58
SNRNP200-201ENST00000323853 RTFDC1Q9BY42 306 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms