RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 TAF6P49848 677 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 FZD5Q13467 585 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 WDR44Q5JSH3 913 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 WSCD1Q658N2 575 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 GAREM2Q75VX8 874 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 BRSK2Q8IWQ3 736 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 CD302Q8IX05 232 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 PDILTQ8N807 584 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 LEMD2Q8NC56 503 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 HPS3Q969F9 1004 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 ZCWPW1Q9H0M4 648 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 ASB7Q9H672 318 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 PRMT8Q9NR22 394 aaPredicted RBP13.35□□□□□ -0.27
TPM3-204ENST00000323144 DPP3Q9NY33 737 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 MAFFQ9ULX9 164 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 PIAS3Q9Y6X2 628 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 OTOGLQ3ZCN5 2332 aa13.35□□□□□ -0.27
TPM3-204ENST00000323144 CYB561D2O14569 222 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 LAMTOR5O43504 91 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 HCRTO43612 131 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 LMNAP02545 664 aaKnown RBP13.34□□□□□ -0.27
TPM3-204ENST00000323144 ITGB3P05106 788 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 GAP43P17677 238 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 PSMC3P17980 439 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 GABRR2P28476 465 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 ABCD1P33897 745 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 NASPP49321 788 aaPredicted RBP13.34□□□□□ -0.27
TPM3-204ENST00000323144 GPR15P49685 360 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 EPHB3P54753 998 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 LMBRD2Q68DH5 695 aaPredicted RBP13.34□□□□□ -0.27
TPM3-204ENST00000323144 C1orf127Q8N9H9 656 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 KCNG4Q8TDN1 519 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 NOC3LQ8WTT2 800 aaKnown RBP13.34□□□□□ -0.27
TPM3-204ENST00000323144 DEPDC1BQ8WUY9 529 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 PSMG2Q969U7 264 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 CLDN23Q96B33 292 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 ZFYVE19Q96K21 471 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 ZNF560Q96MR9 790 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 TSPAN18Q96SJ8 248 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 TRMT61BQ9BVS5 477 aaKnown RBP13.34□□□□□ -0.27
TPM3-204ENST00000323144 OXCT2Q9BYC2 517 aaPredicted RBP13.34□□□□□ -0.27
TPM3-204ENST00000323144 PANK2Q9BZ23 570 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 OSBPL6Q9BZF3 934 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 SMG9Q9H0W8 520 aaKnown RBP13.34□□□□□ -0.27
TPM3-204ENST00000323144 TRPV4Q9HBA0 871 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 IL21Q9HBE4 155 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 OLFML3Q9NRN5 406 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 TMLHEQ9NVH6 421 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 ABI2Q9NYB9 513 aaPredicted RBP13.34□□□□□ -0.27
TPM3-204ENST00000323144 RBAKQ9NYW8 714 aaPredicted RBP13.34□□□□□ -0.27
TPM3-204ENST00000323144 SEL1LQ9UBV2 794 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 L1RE1Q9UN81 338 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 EML5Q05BV3 1969 aa13.34□□□□□ -0.27
TPM3-204ENST00000323144 RIF1Q5UIP0 2472 aaKnown RBP13.33□□□□□ -0.28
TPM3-204ENST00000323144 SLC38A8A6NNN8 435 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 TULP1O00294 542 aaPredicted RBP13.33□□□□□ -0.28
TPM3-204ENST00000323144 STX6O43752 255 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 IL18RAPO95256 599 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 ALDH1A3P47895 512 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 TFAMQ00059 246 aaKnown RBP13.33□□□□□ -0.28
TPM3-204ENST00000323144 CSTF1Q05048 431 aaKnown RBP13.33□□□□□ -0.28
TPM3-204ENST00000323144 BFSP1Q12934 665 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 MTAPQ13126 283 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 SLC39A14Q15043 492 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 MGAT5BQ3V5L5 792 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 SV2CQ496J9 727 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 GPR158Q5T848 1215 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 FOXD4L5Q5VV16 416 aaPredicted RBP13.33□□□□□ -0.28
TPM3-204ENST00000323144 SLFN12LQ6IEE8 588 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 ZC3H14Q6PJT7 736 aaKnown RBP13.33□□□□□ -0.28
TPM3-204ENST00000323144 ZNF852Q6ZMS4 543 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 SV2BQ7L1I2 683 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 LRRTM3Q86VH5 581 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 CXorf38Q8TB03 319 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 GIPC2Q8TF65 315 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 FOXD4L4Q8WXT5 416 aaPredicted RBP13.33□□□□□ -0.28
TPM3-204ENST00000323144 BORCS6Q96GS4 357 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 LRRC3BQ96PB8 259 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 ACCSQ96QU6 501 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 BACH2Q9BYV9 841 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 MTMR12Q9C0I1 747 aa13.33□□□□□ -0.28
TPM3-204ENST00000323144 MORC2Q9Y6X9 1032 aaPredicted RBP13.33□□□□□ -0.28
TPM3-204ENST00000323144 TADA3O75528 432 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 PRPF6O94906 941 aaKnown RBP13.32□□□□□ -0.28
TPM3-204ENST00000323144 ACAT1P24752 427 aaKnown RBP13.32□□□□□ -0.28
TPM3-204ENST00000323144 RPS9P46781 194 aaKnown RBP13.32□□□□□ -0.28
TPM3-204ENST00000323144 STK38Q15208 465 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 E2F4Q16254 413 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 SDHAF4Q5VUM1 108 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 ARMCX5Q6P1M9 558 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 CCDC73Q6ZRK6 1079 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 Q6ZS52 159 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 DNAJB7Q7Z6W7 309 aaPredicted RBP13.32□□□□□ -0.28
TPM3-204ENST00000323144 OSTM1Q86WC4 334 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 PDCL2Q8N4E4 241 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 DCLK2Q8N568 766 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 SUMF1Q8NBK3 374 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 TTC8Q8TAM2 541 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 RIN3Q8TB24 985 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 FAM200AQ8TCP9 573 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms