RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 PPP1R15BQ5SWA1 713 aa23.65■■□□□ 1.38
PNKP-201ENST00000322344 GPAT2Q6NUI2 795 aa23.65■■□□□ 1.38
PNKP-201ENST00000322344 HIBCHQ6NVY1 386 aaPredicted RBP23.65■■□□□ 1.38
PNKP-201ENST00000322344 EEPD1Q7L9B9 569 aa23.65■■□□□ 1.38
PNKP-201ENST00000322344 CCDC197Q8NCU1 140 aa23.65■■□□□ 1.38
PNKP-201ENST00000322344 CNKSR2Q8WXI2 1034 aa23.65■■□□□ 1.38
PNKP-201ENST00000322344 ARHGEF2Q92974 986 aaKnown RBP23.65■■□□□ 1.38
PNKP-201ENST00000322344 ANKRD36BP1Q96IX9 119 aa23.65■■□□□ 1.38
PNKP-201ENST00000322344 MCEEQ96PE7 176 aa23.65■■□□□ 1.38
PNKP-201ENST00000322344 CCDC77Q9BR77 488 aa23.65■■□□□ 1.38
PNKP-201ENST00000322344 NSRP1Q9H0G5 558 aaKnown RBP23.65■■□□□ 1.38
PNKP-201ENST00000322344 PTPRHQ9HD43 1115 aa23.65■■□□□ 1.38
PNKP-201ENST00000322344 H0YHG0 523 aa23.64■■□□□ 1.38
PNKP-201ENST00000322344 CNMDO75829 334 aa23.64■■□□□ 1.38
PNKP-201ENST00000322344 ARIH2O95376 493 aa23.64■■□□□ 1.38
PNKP-201ENST00000322344 VPS41P49754 854 aa23.64■■□□□ 1.38
PNKP-201ENST00000322344 TFAMQ00059 246 aaKnown RBP23.64■■□□□ 1.38
PNKP-201ENST00000322344 EAPPQ56P03 285 aaPredicted RBP23.64■■□□□ 1.38
PNKP-201ENST00000322344 ZFYVE27Q5T4F4 411 aa23.64■■□□□ 1.38
PNKP-201ENST00000322344 SCARA3Q6AZY7 606 aa23.64■■□□□ 1.38
PNKP-201ENST00000322344 ANKS1BQ7Z6G8 1248 aa23.64■■□□□ 1.38
PNKP-201ENST00000322344 ERICH1Q86X53 443 aa23.64■■□□□ 1.38
PNKP-201ENST00000322344 LRRC71Q8N4P6 559 aa23.64■■□□□ 1.38
PNKP-201ENST00000322344 FZD8Q9H461 694 aa23.64■■□□□ 1.38
PNKP-201ENST00000322344 DRG1Q9Y295 367 aaKnown RBP23.64■■□□□ 1.38
PNKP-201ENST00000322344 GOLGA6L7A0A1B0GV03 622 aa23.64■■□□□ 1.37
PNKP-201ENST00000322344 SOCS7O14512 581 aa23.64■■□□□ 1.37
PNKP-201ENST00000322344 IREB2P48200 963 aaKnown RBP23.64■■□□□ 1.37
PNKP-201ENST00000322344 ZNF252P-AS1Q0IIN9 211 aa23.64■■□□□ 1.37
PNKP-201ENST00000322344 ATF7IP2Q5U623 682 aa23.64■■□□□ 1.37
PNKP-201ENST00000322344 SPOCD1Q6ZMY3 1216 aa23.64■■□□□ 1.37
PNKP-201ENST00000322344 ZCCHC9Q8N567 271 aaKnown RBP23.64■■□□□ 1.37
PNKP-201ENST00000322344 ANKS4BQ8N8V4 417 aa23.64■■□□□ 1.37
PNKP-201ENST00000322344 FAXDC2Q96IV6 333 aa23.64■■□□□ 1.37
PNKP-201ENST00000322344 PRMT1Q99873 361 aaKnown RBP23.64■■□□□ 1.37
PNKP-201ENST00000322344 ASCC2Q9H1I8 757 aaPredicted RBP23.64■■□□□ 1.37
PNKP-201ENST00000322344 LGALS13Q9UHV8 139 aa23.64■■□□□ 1.37
PNKP-201ENST00000322344 PAPPA2Q9BXP8 1791 aa23.64■■□□□ 1.37
PNKP-201ENST00000322344 CXCL11O14625 94 aa23.63■■□□□ 1.37
PNKP-201ENST00000322344 IL18RAPO95256 599 aa23.63■■□□□ 1.37
PNKP-201ENST00000322344 ABHD2P08910 425 aa23.63■■□□□ 1.37
PNKP-201ENST00000322344 POLR2BP30876 1174 aaKnown RBP23.63■■□□□ 1.37
PNKP-201ENST00000322344 ITIH4Q14624 930 aa23.63■■□□□ 1.37
PNKP-201ENST00000322344 STAT4Q14765 748 aa23.63■■□□□ 1.37
PNKP-201ENST00000322344 HSDL1Q3SXM5 330 aa23.63■■□□□ 1.37
PNKP-201ENST00000322344 LACTB2Q53H82 288 aaPredicted RBP23.63■■□□□ 1.37
PNKP-201ENST00000322344 MFSD7Q6UXD7 560 aa23.63■■□□□ 1.37
PNKP-201ENST00000322344 XYLT2Q9H1B5 865 aa23.63■■□□□ 1.37
PNKP-201ENST00000322344 IVNS1ABPQ9Y6Y0 642 aa23.63■■□□□ 1.37
PNKP-201ENST00000322344 MED7O43513 233 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 ASPAP45381 313 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 POLNQ7Z5Q5 900 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 PIGWQ7Z7B1 504 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 RHPN2Q8IUC4 686 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 KAT2BQ92831 832 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 LHX5Q9H2C1 402 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 SMARCAD1Q9H4L7 1026 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 EFCC1Q9HA90 598 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 PI4K2BG5E9Z4 385 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 DNALI1O14645 258 aaPredicted RBP23.62■■□□□ 1.37
PNKP-201ENST00000322344 GHRP10912 638 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 ATP13A4Q4VNC1 1196 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 ZNF394Q53GI3 561 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 TAX1BP1Q86VP1 789 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 TRIM50Q86XT4 487 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 DHX37Q8IY37 1157 aaKnown RBP23.62■■□□□ 1.37
PNKP-201ENST00000322344 WDTC1Q8N5D0 677 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 DCPSQ96C86 337 aaKnown RBP23.62■■□□□ 1.37
PNKP-201ENST00000322344 FGD4Q96M96 766 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 FAM118BQ9BPY3 351 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 KDM4CQ9H3R0 1056 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 SAMD15Q9P1V8 674 aa23.62■■□□□ 1.37
PNKP-201ENST00000322344 F8VP50 259 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 HBP1O60381 514 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 WEE2P0C1S8 567 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 ATF7P17544 494 aaPredicted RBP23.61■■□□□ 1.37
PNKP-201ENST00000322344 NF2P35240 595 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 P3H1Q32P28 736 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 CCDC38Q502W7 563 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 TFDP3Q5H9I0 405 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 ERO1BQ86YB8 467 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 SULF1Q8IWU6 871 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 THNSL1Q8IYQ7 743 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 LRRC34Q8IZ02 419 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 RIBC1Q8N443 379 aaPredicted RBP23.61■■□□□ 1.37
PNKP-201ENST00000322344 ALLCQ8N6M5 410 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 TFAP2BQ92481 460 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 SPATA33Q96N06 139 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 OSBPL7Q9BZF2 842 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 DNAJC17Q9NVM6 304 aaKnown RBP23.61■■□□□ 1.37
PNKP-201ENST00000322344 KLHL11Q9NVR0 708 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 ZNF148Q9UQR1 794 aa23.61■■□□□ 1.37
PNKP-201ENST00000322344 hCG_1818297A0A087WSY0 165 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 LOC102724159A0A0B4J2E5 919 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 CDH16O75309 829 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 KRT10P13645 584 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 LACTBP83111 547 aaPredicted RBP23.6■■□□□ 1.37
PNKP-201ENST00000322344 OGDHQ02218 1023 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 PWP2Q15269 919 aaKnown RBP23.6■■□□□ 1.37
PNKP-201ENST00000322344 KAZNQ674X7 775 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms