RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 TCRBV7S2A1N4TA0A589 114 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 GSCP56915 257 aaPredicted RBP16.04■□□□□ 0.16
VARS2-201ENST00000321897 BBOF1Q8ND07 529 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 INPP4AQ96PE3 977 aaPredicted RBP16.04■□□□□ 0.16
VARS2-201ENST00000321897 DHX35Q9H5Z1 703 aaKnown RBP16.04■□□□□ 0.16
VARS2-201ENST00000321897 CYP26B1Q9NR63 512 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 PIH1D1Q9NWS0 290 aaKnown RBP16.04■□□□□ 0.16
VARS2-201ENST00000321897 PCDHGC5Q9Y5F6 944 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 PSMD10O75832 226 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 DNAJC8O75937 253 aaPredicted RBP16.04■□□□□ 0.16
VARS2-201ENST00000321897 GJB1P08034 283 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 ITKQ08881 620 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 GPR162Q16538 588 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 HSD17B14Q9BPX1 270 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 AGO4Q9HCK5 861 aaKnown RBP16.04■□□□□ 0.16
VARS2-201ENST00000321897 GPATCH2LQ9NWQ4 482 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 ASTN2O75129 1339 aaPredicted RBP16.04■□□□□ 0.16
VARS2-201ENST00000321897 DISP2A7MBM2 1401 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 H3BRJ5 948 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 RASSF9O75901 435 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 ATP6V1B1P15313 513 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 LMNB2Q03252 620 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 ERMARDQ5T6L9 678 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 MAP7D3Q8IWC1 876 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 KCNG1Q9UIX4 513 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 PHTF1Q9UMS5 762 aa16.04■□□□□ 0.16
VARS2-201ENST00000321897 PFASO15067 1338 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 NOL3O60936 208 aaKnown RBP16.03■□□□□ 0.16
VARS2-201ENST00000321897 LGSNQ5TDP6 509 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 GMCL1P1Q8NEA9 526 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 HIC2Q96JB3 615 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 IDI2Q9BXS1 227 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 M0R2N6 131 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 LMNAP02545 664 aaKnown RBP16.03■□□□□ 0.16
VARS2-201ENST00000321897 GSTA1P08263 222 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 GHRP10912 638 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 MYL6P60660 151 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 DYNC1I2Q13409 638 aaKnown RBP16.03■□□□□ 0.16
VARS2-201ENST00000321897 RRP1BQ14684 758 aaKnown RBP16.03■□□□□ 0.16
VARS2-201ENST00000321897 SLC25A41Q8N5S1 370 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 MCUQ8NE86 351 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 MRPL4Q9BYD3 311 aaKnown RBP16.03■□□□□ 0.16
VARS2-201ENST00000321897 GTF3C4Q9UKN8 822 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 KIF13AQ9H1H9 1805 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 B2RBV5 119 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 PJA2O43164 708 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 SNX3O60493 162 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 LDHAP00338 332 aaKnown RBP16.03■□□□□ 0.16
VARS2-201ENST00000321897 PGM5Q15124 567 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 CERKQ8TCT0 537 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 ACTRT1Q8TDG2 376 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 LPAR1Q92633 364 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 ETAA1Q9NY74 926 aa16.03■□□□□ 0.16
VARS2-201ENST00000321897 LCP1P13796 627 aa16.02■□□□□ 0.16
VARS2-201ENST00000321897 ATP4AP20648 1035 aa16.02■□□□□ 0.16
VARS2-201ENST00000321897 TCF7P36402 384 aaPredicted RBP16.02■□□□□ 0.16
VARS2-201ENST00000321897 ALDH18A1P54886 795 aaKnown RBP16.02■□□□□ 0.16
VARS2-201ENST00000321897 SESN2P58004 480 aaPredicted RBP16.02■□□□□ 0.16
VARS2-201ENST00000321897 LVRNQ6Q4G3 990 aa16.02■□□□□ 0.16
VARS2-201ENST00000321897 MTDHQ86UE4 582 aaKnown RBP16.02■□□□□ 0.16
VARS2-201ENST00000321897 FAM71DQ8N9W8 422 aa16.02■□□□□ 0.16
VARS2-201ENST00000321897 NMD3Q96D46 503 aaKnown RBP16.02■□□□□ 0.16
VARS2-201ENST00000321897 KIF12Q96FN5 646 aa16.02■□□□□ 0.16
VARS2-201ENST00000321897 SCYL1Q96KG9 808 aa16.02■□□□□ 0.16
VARS2-201ENST00000321897 NUF2Q9BZD4 464 aa16.02■□□□□ 0.16
VARS2-201ENST00000321897 WRAP73Q9P2S5 460 aaPredicted RBP16.02■□□□□ 0.16
VARS2-201ENST00000321897 RIPK3Q9Y572 518 aa16.02■□□□□ 0.16
VARS2-201ENST00000321897 PRRC2BQ5JSZ5 2229 aaKnown RBP16.02■□□□□ 0.16
VARS2-201ENST00000321897 SPECC1L-ADORA2AF8WAN1 911 aa16.02■□□□□ 0.16
VARS2-201ENST00000321897 NME3Q13232 169 aa16.02■□□□□ 0.16
VARS2-201ENST00000321897 LY6KQ17RY6 165 aa16.02■□□□□ 0.16
VARS2-201ENST00000321897 PCGF5Q86SE9 256 aa16.02■□□□□ 0.16
VARS2-201ENST00000321897 RBM41Q96IZ5 413 aaKnown RBP16.02■□□□□ 0.16
VARS2-201ENST00000321897 RAB6BQ9NRW1 208 aa16.02■□□□□ 0.16
VARS2-201ENST00000321897 PARVAQ9NVD7 372 aa16.02■□□□□ 0.16
VARS2-201ENST00000321897 C5P01031 1676 aa16.02■□□□□ 0.15
VARS2-201ENST00000321897 LMO7Q8WWI1 1683 aa16.02■□□□□ 0.15
VARS2-201ENST00000321897 ETS1P14921 441 aa16.02■□□□□ 0.15
VARS2-201ENST00000321897 TPD52P55327 224 aaPredicted RBP16.02■□□□□ 0.15
VARS2-201ENST00000321897 GJC2Q5T442 439 aaPredicted RBP16.02■□□□□ 0.15
VARS2-201ENST00000321897 ACAD10Q6JQN1 1059 aa16.02■□□□□ 0.15
VARS2-201ENST00000321897 CCDC60Q8IWA6 550 aaPredicted RBP16.02■□□□□ 0.15
VARS2-201ENST00000321897 C3orf20Q8ND61 904 aa16.02■□□□□ 0.15
VARS2-201ENST00000321897 SREK1Q8WXA9 508 aaKnown RBP16.02■□□□□ 0.15
VARS2-201ENST00000321897 UVRAGQ9P2Y5 699 aa16.02■□□□□ 0.15
VARS2-201ENST00000321897 SPATA31A6Q5VVP1 1343 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 VIL1P09327 827 aaKnown RBP16.01■□□□□ 0.15
VARS2-201ENST00000321897 PDGFRAP16234 1089 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 FNTAP49354 379 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 EIF3EP60228 445 aaKnown RBP16.01■□□□□ 0.15
VARS2-201ENST00000321897 TAF1BQ53T94 588 aaPredicted RBP16.01■□□□□ 0.15
VARS2-201ENST00000321897 IL31Q6EBC2 164 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 MOXD1Q6UVY6 613 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 RAPH1Q70E73 1250 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 EPS8L1Q8TE68 723 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 PPWD1Q96BP3 646 aaKnown RBP16.01■□□□□ 0.15
VARS2-201ENST00000321897 PXMP2Q9NR77 195 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 DIS3Q9Y2L1 958 aaKnown RBP16.01■□□□□ 0.15
VARS2-201ENST00000321897 KDM3BQ7LBC6 1761 aa16.01■□□□□ 0.15
VARS2-201ENST00000321897 YDJCA8MPS7 323 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms