RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 RHOXF2BP0C7M4 288 aa18.96■□□□□ 0.63
RAB39A-201ENST00000320578 ACLYP53396 1101 aa18.96■□□□□ 0.63
RAB39A-201ENST00000320578 CDH8P55286 799 aa18.96■□□□□ 0.63
RAB39A-201ENST00000320578 GSCP56915 257 aaPredicted RBP18.96■□□□□ 0.63
RAB39A-201ENST00000320578 TAP1Q03518 808 aa18.96■□□□□ 0.63
RAB39A-201ENST00000320578 C2orf54Q08AI8 447 aa18.96■□□□□ 0.63
RAB39A-201ENST00000320578 ITGA7Q13683 1181 aa18.96■□□□□ 0.63
RAB39A-201ENST00000320578 MESDQ14696 234 aa18.96■□□□□ 0.63
RAB39A-201ENST00000320578 CNGA2Q16280 664 aa18.96■□□□□ 0.63
RAB39A-201ENST00000320578 TWF2Q6IBS0 349 aaKnown RBP18.96■□□□□ 0.63
RAB39A-201ENST00000320578 WNT8BQ93098 351 aa18.96■□□□□ 0.63
RAB39A-201ENST00000320578 RHOXF2Q9BQY4 288 aa18.96■□□□□ 0.63
RAB39A-201ENST00000320578 ELOVL4Q9GZR5 314 aa18.96■□□□□ 0.63
RAB39A-201ENST00000320578 PARP2Q9UGN5 583 aa18.96■□□□□ 0.63
RAB39A-201ENST00000320578 CCDC188H7C350 402 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 AKAP5P24588 427 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 CTNNA1P35221 906 aaKnown RBP18.95■□□□□ 0.62
RAB39A-201ENST00000320578 RAP1GAPP47736 663 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 PEX5P50542 639 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 MAMLD1Q13495 774 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 ZNF394Q53GI3 561 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 TMCO3Q6UWJ1 677 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 UNC93AQ86WB7 457 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 PASD1Q8IV76 773 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 WDTC1Q8N5D0 677 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 ZNF560Q96MR9 790 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 PNKPQ96T60 521 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 C11orf70Q9BRQ4 267 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 SEZ6LQ9BYH1 1024 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 GDAP2Q9NXN4 497 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 STRIP2Q9ULQ0 834 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 PCDHA3Q9Y5H8 950 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 MYO1FO00160 1098 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 ERLIN1O75477 346 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 CAPN15O75808 1086 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 LRPAP1P30533 357 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 MAN1A1P33908 653 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 DNA2P51530 1060 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 PPP2R5EQ16537 467 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 TRIM71Q2Q1W2 868 aaKnown RBP18.95■□□□□ 0.62
RAB39A-201ENST00000320578 MMS22LQ6ZRQ5 1243 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 MRPL10Q7Z7H8 261 aaKnown RBP18.95■□□□□ 0.62
RAB39A-201ENST00000320578 NT5C1AQ9BXI3 368 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 CXCL16Q9H2A7 254 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 RNF39Q9H2S5 420 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 ERVK-5Q9HDB9 667 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 RBM12Q9NTZ6 932 aaKnown RBP18.95■□□□□ 0.62
RAB39A-201ENST00000320578 TUBGCP4Q9UGJ1 667 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 ANAPC7Q9UJX3 599 aa18.95■□□□□ 0.62
RAB39A-201ENST00000320578 TCRBV5S1A1TA0A578 114 aa18.94■□□□□ 0.62
RAB39A-201ENST00000320578 ZNF623O75123 536 aa18.94■□□□□ 0.62
RAB39A-201ENST00000320578 CD19P15391 556 aa18.94■□□□□ 0.62
RAB39A-201ENST00000320578 LHX8Q68G74 356 aa18.94■□□□□ 0.62
RAB39A-201ENST00000320578 LIMS2Q7Z4I7 341 aa18.94■□□□□ 0.62
RAB39A-201ENST00000320578 SLC43A3Q8NBI5 491 aa18.94■□□□□ 0.62
RAB39A-201ENST00000320578 C18orf25Q96B23 403 aaPredicted RBP18.94■□□□□ 0.62
RAB39A-201ENST00000320578 TWNKQ96RR1 684 aa18.94■□□□□ 0.62
RAB39A-201ENST00000320578 HMX1Q9NP08 348 aaPredicted RBP18.94■□□□□ 0.62
RAB39A-201ENST00000320578 FAM105AQ9NUU6 356 aa18.94■□□□□ 0.62
RAB39A-201ENST00000320578 EHD2Q9NZN4 543 aa18.94■□□□□ 0.62
RAB39A-201ENST00000320578 WDR35Q9P2L0 1181 aa18.94■□□□□ 0.62
RAB39A-201ENST00000320578 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.94■□□□□ 0.62
RAB39A-201ENST00000320578 PROSCO94903 275 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 INHAP05111 366 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 HSPA6P17066 643 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 RAB27AP51159 221 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 SGO2Q562F6 1265 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 FBXO47Q5MNV8 452 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 CC2D1AQ6P1N0 951 aaPredicted RBP18.93■□□□□ 0.62
RAB39A-201ENST00000320578 ERICH1Q86X53 443 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 C1orf131Q8NDD1 294 aaKnown RBP18.93■□□□□ 0.62
RAB39A-201ENST00000320578 FEZF2Q8TBJ5 459 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 GLT1D1Q96MS3 346 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 APOL6Q9BWW8 343 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 DNAI2Q9GZS0 605 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 ARFGAP3Q9NP61 516 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 SLC38A7Q9NVC3 462 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 SMARCAL1Q9NZC9 954 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 CHORDC1Q9UHD1 332 aaPredicted RBP18.93■□□□□ 0.62
RAB39A-201ENST00000320578 GIT1Q9Y2X7 761 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 O00370 1275 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 SPOPO43791 374 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 ZRANB2O95218 330 aaKnown RBP eCLIP18.93■□□□□ 0.62
RAB39A-201ENST00000320578 THPOP40225 353 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 NDST1P52848 882 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 DCAF12L1Q5VU92 463 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 DENND1BQ6P3S1 775 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 LCLAT1Q6UWP7 414 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 DPH6Q7L8W6 267 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 TMEM130Q8N3G9 435 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 ZNF784Q8NCA9 323 aaPredicted RBP18.93■□□□□ 0.62
RAB39A-201ENST00000320578 ALG3Q92685 438 aa18.93■□□□□ 0.62
RAB39A-201ENST00000320578 PPP1R10Q96QC0 940 aaKnown RBP18.93■□□□□ 0.62
RAB39A-201ENST00000320578 ITGA4P13612 1032 aa18.92■□□□□ 0.62
RAB39A-201ENST00000320578 GRK4P32298 578 aa18.92■□□□□ 0.62
RAB39A-201ENST00000320578 VSNL1P62760 191 aa18.92■□□□□ 0.62
RAB39A-201ENST00000320578 DSC3Q14574 896 aa18.92■□□□□ 0.62
RAB39A-201ENST00000320578 GLRA4Q5JXX5 417 aa18.92■□□□□ 0.62
RAB39A-201ENST00000320578 FAM43BQ6ZT52 329 aaPredicted RBP18.92■□□□□ 0.62
RAB39A-201ENST00000320578 ARRDC4Q8NCT1 418 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms