RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 GTF2BQ00403 316 aa15.42■□□□□ 0.06
RPP40-201ENST00000319533 SATB1Q01826 763 aa15.42■□□□□ 0.06
RPP40-201ENST00000319533 LRRC32Q14392 662 aa15.42■□□□□ 0.06
RPP40-201ENST00000319533 STXBP5Q5T5C0 1151 aa15.42■□□□□ 0.06
RPP40-201ENST00000319533 JADE1Q6IE81 842 aa15.42■□□□□ 0.06
RPP40-201ENST00000319533 SLC39A4Q6P5W5 647 aa15.42■□□□□ 0.06
RPP40-201ENST00000319533 RALGPS2Q86X27 583 aaPredicted RBP15.42■□□□□ 0.06
RPP40-201ENST00000319533 CSGALNACT1Q8TDX6 532 aa15.42■□□□□ 0.06
RPP40-201ENST00000319533 TMEM209Q96SK2 561 aa15.42■□□□□ 0.06
RPP40-201ENST00000319533 RTKNQ9BST9 563 aa15.42■□□□□ 0.06
RPP40-201ENST00000319533 PARVGQ9HBI0 331 aa15.42■□□□□ 0.06
RPP40-201ENST00000319533 SLC27A5Q9Y2P5 690 aa15.42■□□□□ 0.06
RPP40-201ENST00000319533 SPTBN2O15020 2390 aa15.42■□□□□ 0.06
RPP40-201ENST00000319533 TSC2P49815 1807 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 K7ESF4 209 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 RETP07949 1114 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 ODC1P11926 461 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 HOXA6P31267 233 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 CNR2P34972 360 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 POU5F1Q01860 360 aaKnown RBP15.41■□□□□ 0.06
RPP40-201ENST00000319533 ARHGAP29Q52LW3 1261 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 DGKKQ5KSL6 1271 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 ARMCX5Q6P1M9 558 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 ITIH5Q86UX2 942 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 GPBP1Q86WP2 473 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 MYCT1Q8N699 235 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 TTC9BQ8N6N2 239 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 OR10T2Q8NGX3 314 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 CALML4Q96GE6 196 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 MSTO1Q9BUK6 570 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 ZCWPW1Q9H0M4 648 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 ASB7Q9H672 318 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 RAB23Q9ULC3 237 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 STYXL1Q9Y6J8 313 aa15.41■□□□□ 0.06
RPP40-201ENST00000319533 NUP210Q8TEM1 1887 aaPredicted RBP15.41■□□□□ 0.06
RPP40-201ENST00000319533 SPECC1L-ADORA2AF8WAN1 911 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 K7ENM7 598 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 HRO43593 1189 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 TRAK2O60296 914 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 NFICP08651 508 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 GABRR2P28476 465 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 CTHP32929 405 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 SOX9P48436 509 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 TUFMP49411 452 aaKnown RBP15.4■□□□□ 0.06
RPP40-201ENST00000319533 KPNA1P52294 538 aaPredicted RBP15.4■□□□□ 0.06
RPP40-201ENST00000319533 GPR158Q5T848 1215 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 TXNDC11Q6PKC3 985 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 SYNPOQ8N3V7 929 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 CCSER1Q9C0I3 900 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 ATXN3LQ9H3M9 355 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 ST6GALNAC4Q9H4F1 302 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 TASP1Q9H6P5 420 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 IL21Q9HBE4 155 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 CDV3Q9UKY7 258 aaKnown RBP15.4■□□□□ 0.06
RPP40-201ENST00000319533 DSEQ9UL01 958 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 USP18Q9UMW8 372 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 C2CD2Q9Y426 696 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 EPG5Q9HCE0 2579 aa15.4■□□□□ 0.06
RPP40-201ENST00000319533 TPRP12270 2363 aaKnown RBP15.4■□□□□ 0.06
RPP40-201ENST00000319533 SLC38A8A6NNN8 435 aa15.39■□□□□ 0.05
RPP40-201ENST00000319533 ANKRD63C9JTQ0 380 aa15.39■□□□□ 0.05
RPP40-201ENST00000319533 SOAT2O75908 522 aa15.39■□□□□ 0.05
RPP40-201ENST00000319533 FAM13AO94988 1023 aa15.39■□□□□ 0.05
RPP40-201ENST00000319533 ATF6P18850 670 aa15.39■□□□□ 0.05
RPP40-201ENST00000319533 LONP1P36776 959 aaKnown RBP15.39■□□□□ 0.05
RPP40-201ENST00000319533 UBA7P41226 1012 aa15.39■□□□□ 0.05
RPP40-201ENST00000319533 PLCB2Q00722 1185 aa15.39■□□□□ 0.05
RPP40-201ENST00000319533 DMWDQ09019 674 aa15.39■□□□□ 0.05
RPP40-201ENST00000319533 SMARCB1Q12824 385 aa15.39■□□□□ 0.05
RPP40-201ENST00000319533 CCINQ13939 588 aa15.39■□□□□ 0.05
RPP40-201ENST00000319533 TMEM132DQ14C87 1099 aa15.39■□□□□ 0.05
RPP40-201ENST00000319533 ARHGAP15Q53QZ3 475 aa15.39■□□□□ 0.05
RPP40-201ENST00000319533 LARP1BQ659C4 914 aaKnown RBP15.39■□□□□ 0.05
RPP40-201ENST00000319533 LONP2Q86WA8 852 aa15.39■□□□□ 0.05
RPP40-201ENST00000319533 C2orf15Q8WU43 125 aaKnown RBP15.39■□□□□ 0.05
RPP40-201ENST00000319533 RAD54LQ92698 747 aa15.39■□□□□ 0.05
RPP40-201ENST00000319533 RBM12Q9NTZ6 932 aaKnown RBP15.39■□□□□ 0.05
RPP40-201ENST00000319533 ZMYM5Q9UJ78 669 aa15.39■□□□□ 0.05
RPP40-201ENST00000319533 SCN1AP35498 2009 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 ANK1P16157 1881 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 KIF26AQ9ULI4 1882 aaPredicted RBP15.38■□□□□ 0.05
RPP40-201ENST00000319533 CHURC1-FNTBB4DL54 471 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 DPYSL4O14531 572 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 PRAMEF12O95522 483 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 BMP15O95972 392 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 PLCG1P19174 1290 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 CDC25CP30307 473 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 FNTBP49356 437 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 SPEM2Q0P670 501 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 CUL4AQ13619 759 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 SIM2Q14190 667 aaPredicted RBP15.38■□□□□ 0.05
RPP40-201ENST00000319533 MCM6Q14566 821 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 SLFN12LQ6IEE8 588 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 Q6ZS52 159 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 BPIFB1Q8TDL5 484 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 FAM212AQ96EL1 285 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 LPIN3Q9BQK8 851 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 GTSE1Q9NYZ3 720 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 ACACBO00763 2458 aa15.38■□□□□ 0.05
RPP40-201ENST00000319533 SLC30A4O14863 429 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms