RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 ABRAQ8N0Z2 381 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 DNAAF3Q8N9W5 541 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 RIN2Q8WYP3 895 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 PGBD4Q96DM1 585 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 MAML3Q96JK9 1138 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 ZSWIM1Q9BR11 485 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 PCDHA2Q9Y5H9 948 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 CASTOR2A6NHX0 329 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 RECQL4O94761 1208 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 KRT14P02533 472 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 TAP1Q03518 808 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 ZACNQ401N2 412 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 LNX1Q8TBB1 728 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 ATG4AQ8WYN0 398 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 CARD9Q9H257 536 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 SLC38A7Q9NVC3 462 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 ARHGAP28Q9P2N2 729 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 FBXL5Q9UKA1 691 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 C4AP0C0L4 1744 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 NDC80O14777 642 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 RASGRF2O14827 1237 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 TADA2AO75478 443 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 ZBTB48P10074 688 aaPredicted RBP9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 SAT1P21673 171 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 PRKCIP41743 596 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 NDST1P52848 882 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 CLEC16AQ2KHT3 1053 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 FOXR2Q6PJQ5 311 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 PDIK1LQ8N165 341 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 BCAS4Q8TDM0 211 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 TELO2Q9Y4R8 837 aa9.81□□□□□ -0.84
TMEM39A-201ENST00000319172 NRCAMQ92823 1304 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 TARSL2A2RTX5 802 aaKnown RBP9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 ZNF263O14978 683 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 MAP3K6O95382 1288 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 POMCP01189 267 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 ELNP15502 786 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 PIGHQ14442 188 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 TMED2Q15363 201 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 KCTD19Q17RG1 926 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 LGSNQ5TDP6 509 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 MEI1Q5TIA1 1274 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 CCDC121Q6ZUS5 278 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 PCSK9Q8NBP7 692 aaKnown RBP9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 FAF2Q96CS3 445 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 THSD7AQ9UPZ6 1657 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 NAV1Q8NEY1 1877 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 A0A0B4J269 797 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 GPR182O15218 404 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 KRT10P13645 584 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 SMPD1P17405 629 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 ARF4P18085 180 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 ACAT1P24752 427 aaKnown RBP9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 ELF1P32519 619 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 STILQ15468 1287 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 SMAD1Q15797 465 aaKnown RBP9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 DEFB115Q30KQ5 88 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 ALS2CLQ60I27 953 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 TTC13Q8NBP0 860 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 PPTC7Q8NI37 304 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 TMEM176AQ96HP8 235 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 ASB7Q9H672 318 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 STARD7Q9NQZ5 370 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 TNFSF13BQ9Y275 285 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 EXOC1LA0A1B0GW35 172 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 FAM187AA6NFU0 413 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 ZBTB24O43167 697 aaPredicted RBP9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 HNRNPH3P31942 346 aaKnown RBP9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 GRIK1P39086 918 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 ARSEP51690 589 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 DCAF6Q58WW2 860 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 FBXO47Q5MNV8 452 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 TAF2Q6P1X5 1199 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 JAMLQ86YT9 394 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 MCOLN2Q8IZK6 566 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 PYROXD1Q8WU10 500 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 APBA2Q99767 749 aa9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 DDX56Q9NY93 547 aaKnown RBP9.8□□□□□ -0.84
TMEM39A-201ENST00000319172 CYB561D2O14569 222 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 CST8O60676 142 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 PHF2O75151 1096 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 CPP00450 1065 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 ADSSP30520 456 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 IZUMO3Q5VZ72 239 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 ZNF410Q86VK4 478 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 SLC13A5Q86YT5 568 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 CD302Q8IX05 232 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 SHC3Q92529 594 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 NIFKQ9BYG3 293 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 SMYD3Q9H7B4 428 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 ZSCAN5CA6NGD5 496 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 THP07101 528 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 MMP3P08254 477 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 VDRP11473 427 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 SP3Q02447 781 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 RCOR2Q8IZ40 523 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 MMGT1Q8N4V1 131 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 SMC1BQ8NDV3 1235 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 ATL2Q8NHH9 583 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms