RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SOWAHDA6NJG2 315 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 ATP2C2O75185 946 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 ODC1P11926 461 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 CD19P15391 556 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 RFX1P22670 979 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 CLCN1P35523 988 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 MTF1Q14872 753 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 RASIP1Q5U651 963 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 FUT10Q6P4F1 479 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 ACOT1Q86TX2 421 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 DNAAF5Q86Y56 855 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 LRRC8AQ8IWT6 810 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 COLGALT1Q8NBJ5 622 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 DNAJC7Q99615 494 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 C17orf80Q9BSJ5 609 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 COLEC11Q9BWP8 271 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 SNX25Q9H3E2 840 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 HAUS4Q9H6D7 363 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 FAM49BQ9NUQ9 324 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 GDAP2Q9NXN4 497 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 DDX43Q9NXZ2 648 aaKnown RBP16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 FBXL5Q9UKA1 691 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 KIAA1671Q9BY89 1806 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 STAU1O95793 577 aaKnown RBP16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 BRD2P25440 801 aaKnown RBP16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 GSDMDP57764 484 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 KLHL30Q0D2K2 578 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 PASD1Q8IV76 773 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 WHAMMQ8TF30 809 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 AUTS2Q8WXX7 1259 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 TMEM169Q96HH4 297 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 ELOVL4Q9GZR5 314 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 KCNF1Q9H3M0 494 aa16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 ALG13Q9NP73 1137 aaKnown RBP16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 ZNHIT6Q9NWK9 470 aaKnown RBP16.44■□□□□ 0.22
PDLIM5-202ENST00000318007 SF3B1O75533 1304 aaKnown RBP eCLIP16.43■□□□□ 0.223e-6■■■■■ 150.5
PDLIM5-202ENST00000318007 CILPO75339 1184 aa16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 OR4Q2P0C623 313 aa16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 CTNNB1P35222 781 aa16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 GNL1P36915 607 aaPredicted RBP16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 ARPP19P56211 112 aa16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 RTP2Q5QGT7 225 aa16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 ENOSF1Q7L5Y1 443 aa16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 FAM71AQ8IYT1 594 aa16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 PHOSPHO2Q8TCD6 241 aa16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 IGSF21Q96ID5 467 aa16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 TMEM209Q96SK2 561 aa16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 BAG1Q99933 345 aaPredicted RBP16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 TMEM175Q9BSA9 504 aa16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 VN1R3Q9BXE9 311 aa16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 ARHGAP20Q9P2F6 1191 aa16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 YBX2Q9Y2T7 364 aaKnown RBP16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 TRANK1O15050 2925 aa16.43■□□□□ 0.22
PDLIM5-202ENST00000318007 LINC01553A4QN01 128 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 CFHP08603 1231 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 LAG3P18627 525 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 GNA15P30679 374 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 AARSP49588 968 aaKnown RBP eCLIP16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 YWHAHQ04917 246 aaPredicted RBP16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 PTK2Q05397 1052 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 PRSS55Q6UWB4 352 aaPredicted RBP16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 FAM43BQ6ZT52 329 aaPredicted RBP16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 IRF2BP2Q7Z5L9 587 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 NOP9Q86U38 636 aaKnown RBP16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 SUSD3Q96L08 255 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 HEXIM2Q96MH2 286 aaKnown RBP16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 BARX2Q9UMQ3 279 aaPredicted RBP16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 THAP12O43422 761 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 LINC00271P0C7V0 271 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 CYP11B1P15538 503 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 RPL17P18621 184 aaKnown RBP16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 PDE6CP51160 858 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 RAD23BP54727 409 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 KIAA0319Q5VV43 1072 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 HGSNATQ68CP4 663 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 OVOS1Q6IE37 1185 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 TOP6BLQ8N6T0 577 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 UBR7Q8N806 425 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 KLHL23Q8NBE8 558 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 SLC4A11Q8NBS3 891 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 IQCDQ96DY2 449 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 PBX4Q9BYU1 374 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 DEF6Q9H4E7 631 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 SPTLC3Q9NUV7 552 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 PCDHB12Q9Y5F1 795 aa16.42■□□□□ 0.22
PDLIM5-202ENST00000318007 TMCO5BA8MYB1 307 aa16.41■□□□□ 0.22
PDLIM5-202ENST00000318007 TRAPPC3O43617 180 aa16.41■□□□□ 0.22
PDLIM5-202ENST00000318007 FGF18O76093 207 aa16.41■□□□□ 0.22
PDLIM5-202ENST00000318007 MMEP08473 750 aa16.41■□□□□ 0.22
PDLIM5-202ENST00000318007 CCDC130P13994 396 aa16.41■□□□□ 0.22
PDLIM5-202ENST00000318007 VARS2Q5ST30 1063 aaKnown RBP16.41■□□□□ 0.22
PDLIM5-202ENST00000318007 KIAA1841Q6NSI8 718 aa16.41■□□□□ 0.22
PDLIM5-202ENST00000318007 ZNF571Q7Z3V5 609 aaPredicted RBP16.41■□□□□ 0.22
PDLIM5-202ENST00000318007 SLC39A11Q8N1S5 342 aa16.41■□□□□ 0.22
PDLIM5-202ENST00000318007 EPS8L1Q8TE68 723 aa16.41■□□□□ 0.22
PDLIM5-202ENST00000318007 TFAP2BQ92481 460 aa16.41■□□□□ 0.22
PDLIM5-202ENST00000318007 TMEM176AQ96HP8 235 aa16.41■□□□□ 0.22
PDLIM5-202ENST00000318007 NT5C1AQ9BXI3 368 aa16.41■□□□□ 0.22
PDLIM5-202ENST00000318007 CYP3A43Q9HB55 503 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms