RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 GOLGA8MH3BSY2 632 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 DNAJC6O75061 913 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 KRT7P08729 469 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 HP1BP3Q5SSJ5 553 aaPredicted RBP11.31□□□□□ -0.6
HNF4A-201ENST00000316099 HYIQ5T013 277 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 GPD1LQ8N335 351 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 PPM1NQ8N819 430 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 SCG3Q8WXD2 468 aaKnown RBP11.31□□□□□ -0.6
HNF4A-201ENST00000316099 PNKPQ96T60 521 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 DNAJC7Q99615 494 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 CD248Q9HCU0 757 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 A1CFQ9NQ94 594 aaKnown RBP11.31□□□□□ -0.6
HNF4A-201ENST00000316099 FAM47DPA6NHR8 397 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 ZNF189O75820 626 aaPredicted RBP11.31□□□□□ -0.6
HNF4A-201ENST00000316099 UCHL3P15374 230 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 TBXAS1P24557 533 aaPredicted RBP11.31□□□□□ -0.6
HNF4A-201ENST00000316099 VHLP40337 213 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 TAP1Q03518 808 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 KCNV1Q6PIU1 500 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 USP38Q8NB14 1042 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 FAM149B1Q96BN6 582 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 hCG_2014768A0A024R1R8 64 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 RNF103-CHMP3A0A140T963 221 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 CLDN3O15551 220 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 KDM1AO60341 852 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 ITGB5P18084 799 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 HERVK_113P62684 666 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 CNTN2Q02246 1040 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 YWHAHQ04917 246 aaPredicted RBP11.31□□□□□ -0.6
HNF4A-201ENST00000316099 CYLC2Q14093 348 aaPredicted RBP11.31□□□□□ -0.6
HNF4A-201ENST00000316099 NAB2Q15742 525 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 SCARA5Q6ZMJ2 495 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 SEPT1Q8WYJ6 367 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 TSSK1BQ9BXA7 367 aa11.31□□□□□ -0.6
HNF4A-201ENST00000316099 MTO1Q9Y2Z2 717 aaKnown RBP11.31□□□□□ -0.6
HNF4A-201ENST00000316099 IGF2BP3O00425 579 aaKnown RBP eCLIP11.3□□□□□ -0.62e-8■■□□□ 14.4
HNF4A-201ENST00000316099 CNGA3Q16281 694 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 USP50Q70EL3 339 aaPredicted RBP11.3□□□□□ -0.6
HNF4A-201ENST00000316099 TRAPPC11Q7Z392 1133 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 GLYCTKQ8IVS8 523 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 C4orf19Q8IY42 314 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 HEXIM2Q96MH2 286 aaKnown RBP11.3□□□□□ -0.6
HNF4A-201ENST00000316099 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.3□□□□□ -0.6
HNF4A-201ENST00000316099 CELF2O95319 508 aaKnown RBP11.3□□□□□ -0.6
HNF4A-201ENST00000316099 SOX10P56693 466 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 ROR1Q01973 937 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 GJB7Q6PEY0 223 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 PSPC1Q8WXF1 523 aaKnown RBP11.3□□□□□ -0.6
HNF4A-201ENST00000316099 SYN2Q92777 582 aaPredicted RBP11.3□□□□□ -0.6
HNF4A-201ENST00000316099 TRIM51Q9BSJ1 452 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 ZC4H2Q9NQZ6 224 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 TBC1D23Q9NUY8 699 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 FAM8A1Q9UBU6 413 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 NXF1Q9UBU9 619 aaKnown RBP11.3□□□□□ -0.6
HNF4A-201ENST00000316099 TTC7AQ9ULT0 858 aaPredicted RBP11.3□□□□□ -0.6
HNF4A-201ENST00000316099 UBIAD1Q9Y5Z9 338 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 SPDYE16A6NNV3 312 aaPredicted RBP11.3□□□□□ -0.6
HNF4A-201ENST00000316099 SERPINB10P48595 397 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 PAPOLAP51003 745 aaKnown RBP11.3□□□□□ -0.6
HNF4A-201ENST00000316099 TREML2Q5T2D2 321 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 GPRC5AQ8NFJ5 357 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 C1orf54Q8WWF1 131 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.3□□□□□ -0.61e-6■■■■■ 28
HNF4A-201ENST00000316099 FAM49AQ9H0Q0 323 aaPredicted RBP11.3□□□□□ -0.6
HNF4A-201ENST00000316099 ASCC2Q9H1I8 757 aaPredicted RBP11.3□□□□□ -0.6
HNF4A-201ENST00000316099 OLFML3Q9NRN5 406 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 ADA2Q9NZK5 511 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 GGT7Q9UJ14 662 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 DBR1Q9UK59 544 aaKnown RBP11.3□□□□□ -0.6
HNF4A-201ENST00000316099 RIPK3Q9Y572 518 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 IRF6O14896 467 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 TCF7P36402 384 aaPredicted RBP11.3□□□□□ -0.6
HNF4A-201ENST00000316099 SLC12A1Q13621 1099 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 ARSHQ5FYA8 562 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 ZNF507Q8TCN5 953 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 VPS11Q9H270 941 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 IL1RAPL1Q9NZN1 696 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 PSMC3IPQ9P2W1 217 aaPredicted RBP11.3□□□□□ -0.6
HNF4A-201ENST00000316099 MAGEA13PA6NCF6 341 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 USP2O75604 605 aaPredicted RBP11.3□□□□□ -0.6
HNF4A-201ENST00000316099 AKAP3O75969 853 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 ESRRBO95718 433 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 SUPT20HL2P0C7V6 817 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 CETPP11597 493 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 MAPK6Q16659 721 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 ARL13BQ3SXY8 428 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 DLK2Q6UY11 383 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 ERP27Q96DN0 273 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 AP5M1Q9H0R1 490 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 CYP4F11Q9HBI6 524 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 COL20A1Q9P218 1284 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 FRMPD4Q14CM0 1322 aa11.3□□□□□ -0.6
HNF4A-201ENST00000316099 LRRC10BA6NIK2 292 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 ENO1P06733 434 aaKnown RBP11.29□□□□□ -0.6
HNF4A-201ENST00000316099 RARRES1P49788 294 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 PPATQ06203 517 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 SNRNP35Q16560 246 aaKnown RBP11.29□□□□□ -0.6
HNF4A-201ENST00000316099 HIF1AQ16665 826 aa11.29□□□□□ -0.6
HNF4A-201ENST00000316099 LMBRD2Q68DH5 695 aaPredicted RBP11.29□□□□□ -0.6
HNF4A-201ENST00000316099 C1orf186Q6ZWK4 172 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms