RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 MMP3P08254 477 aa13.18□□□□□ -0.3
RNF4-201ENST00000314289 RALAP11233 206 aa13.18□□□□□ -0.3
RNF4-201ENST00000314289 PTGIRP43119 386 aa13.18□□□□□ -0.3
RNF4-201ENST00000314289 ENPEPQ07075 957 aa13.18□□□□□ -0.3
RNF4-201ENST00000314289 SLC10A6Q3KNW5 377 aa13.18□□□□□ -0.3
RNF4-201ENST00000314289 GLRA4Q5JXX5 417 aa13.18□□□□□ -0.3
RNF4-201ENST00000314289 RNF187Q5TA31 235 aaPredicted RBP13.18□□□□□ -0.3
RNF4-201ENST00000314289 ALS2CLQ60I27 953 aa13.18□□□□□ -0.3
RNF4-201ENST00000314289 TXNRD3NBQ6F5E7 133 aa13.18□□□□□ -0.3
RNF4-201ENST00000314289 DENND1BQ6P3S1 775 aa13.18□□□□□ -0.3
RNF4-201ENST00000314289 PLEKHH3Q7Z736 793 aa13.18□□□□□ -0.3
RNF4-201ENST00000314289 KCNN1Q92952 543 aa13.18□□□□□ -0.3
RNF4-201ENST00000314289 PRMT7Q9NVM4 692 aaPredicted RBP13.18□□□□□ -0.3
RNF4-201ENST00000314289 DNAJC17Q9NVM6 304 aaKnown RBP13.18□□□□□ -0.3
RNF4-201ENST00000314289 FLRT1Q9NZU1 646 aa13.18□□□□□ -0.3
RNF4-201ENST00000314289 TRIP11Q15643 1979 aa13.18□□□□□ -0.3
RNF4-201ENST00000314289 STRNO43815 780 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 KRT10P13645 584 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 CTNNA2P26232 953 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 POLR2BP30876 1174 aaKnown RBP13.17□□□□□ -0.3
RNF4-201ENST00000314289 HSPA9P38646 679 aaKnown RBP13.17□□□□□ -0.3
RNF4-201ENST00000314289 ZNF132P52740 706 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 HUNKP57058 714 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 OGDHQ02218 1023 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 ADCY2Q08462 1091 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 SGO2Q562F6 1265 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 FAM182AQ5T1J6 154 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 CST9Q5W186 159 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 DUPD1Q68J44 220 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 EXOC8Q8IYI6 725 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 FMO2Q99518 471 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 APOL6Q9BWW8 343 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 CYTH4Q9UIA0 394 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 SMIM23A6NLE4 172 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 PROSCO94903 275 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 HPDP32754 393 aaPredicted RBP13.17□□□□□ -0.3
RNF4-201ENST00000314289 COILP38432 576 aaPredicted RBP13.17□□□□□ -0.3
RNF4-201ENST00000314289 ZNF200P98182 395 aaPredicted RBP13.17□□□□□ -0.3
RNF4-201ENST00000314289 GRB14Q14449 540 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 ZNF667Q5HYK9 610 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 DCUN1D2Q6PH85 259 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 TMC3Q7Z5M5 1100 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 CCDC91Q7Z6B0 441 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 CCDC25Q86WR0 208 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 UBR7Q8N806 425 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 DDX27Q96GQ7 796 aaKnown RBP13.17□□□□□ -0.3
RNF4-201ENST00000314289 OSMRQ99650 979 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 AVENQ9NQS1 362 aaPredicted RBP13.17□□□□□ -0.3
RNF4-201ENST00000314289 CNTN6Q9UQ52 1028 aa13.17□□□□□ -0.3
RNF4-201ENST00000314289 B4GALT4O60513 344 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 MMP8P22894 467 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 GCLCP48506 637 aaPredicted RBP13.16□□□□□ -0.3
RNF4-201ENST00000314289 BEX3Q00994 111 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 GRM1Q13255 1194 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 PPP1R7Q15435 360 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 DUSP28Q4G0W2 176 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 ANKRD23Q86SG2 305 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 HOMEZQ8IX15 550 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 HAUS1Q96CS2 278 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 RAB17Q9H0T7 212 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 MTUS1Q9ULD2 1270 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 AGAP1Q9UPQ3 857 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 ANK1P16157 1881 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 IGF2BP3O00425 579 aaKnown RBP eCLIP13.16□□□□□ -0.3
RNF4-201ENST00000314289 ASAP2O43150 1006 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 TSPAN1O60635 241 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 CYP2B6P20813 491 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 IBSPP21815 317 aaPredicted RBP13.16□□□□□ -0.3
RNF4-201ENST00000314289 CHRNA3P32297 505 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 TNFAIP2Q03169 654 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 ZNF252P-AS1Q0IIN9 211 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 ILDR2Q71H61 639 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 PHF13Q86YI8 300 aaPredicted RBP13.16□□□□□ -0.3
RNF4-201ENST00000314289 EMC1Q8N766 993 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 CCDC114Q96M63 670 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 PARK7Q99497 189 aaKnown RBP13.16□□□□□ -0.3
RNF4-201ENST00000314289 NMRK2Q9NPI5 230 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 MORF4L1Q9UBU8 362 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 PPME1Q9Y570 386 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 MYBL1P10243 752 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 ATF7P17544 494 aaPredicted RBP13.16□□□□□ -0.3
RNF4-201ENST00000314289 AP3M2P53677 418 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 SEC24CP53992 1094 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 HIC1Q14526 733 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 PLEKHA7Q6IQ23 1121 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 ZDHHC24Q6UX98 284 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 B4GALNT4Q76KP1 1039 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 ERICH1Q86X53 443 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 UBA3Q8TBC4 463 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 FEZF2Q8TBJ5 459 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 PWWP2AQ96N64 755 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 ABHD16BQ9H3Z7 469 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 FAM114A2Q9NRY5 505 aa13.16□□□□□ -0.3
RNF4-201ENST00000314289 BHMG1C9JSJ3 638 aaPredicted RBP13.15□□□□□ -0.3
RNF4-201ENST00000314289 PPEF2O14830 753 aa13.15□□□□□ -0.3
RNF4-201ENST00000314289 MAGEB2O15479 319 aa13.15□□□□□ -0.3
RNF4-201ENST00000314289 LSP1P33241 339 aa13.15□□□□□ -0.3
RNF4-201ENST00000314289 DGKDQ16760 1214 aa13.15□□□□□ -0.3
RNF4-201ENST00000314289 SMTNL2Q2TAL5 461 aa13.15□□□□□ -0.3
RNF4-201ENST00000314289 DNAJC24Q6P3W2 148 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms