RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 TRMT10CQ7L0Y3 403 aaKnown RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 SEMA4DQ92854 862 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 TGS1Q96RS0 853 aaKnown RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 GDF3Q9NR23 364 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 GRIN3BO60391 1043 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 CAND2O75155 1236 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 CHN1P15882 459 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 FMO1Q01740 532 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 AP1B1Q10567 949 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 THOC5Q13769 683 aaKnown RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 ABHD15Q6UXT9 468 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 GABPB2Q8TAK5 448 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 AENQ8WTP8 325 aaKnown RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 SHC3Q92529 594 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 PORCNQ9H237 461 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 VPS11Q9H270 941 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 PSD3Q9NYI0 1048 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 FNDC3AQ9Y2H6 1198 aaKnown RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 RRN3P2A6NIE6 340 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 PLCB4Q15147 1175 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 TRADDQ15628 312 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 LBX2Q6XYB7 198 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 DAW1Q8N136 415 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 TTC39CQ8N584 583 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 REPS2Q8NFH8 660 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 OSMRQ99650 979 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 CDT1Q9H211 546 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 TLK1Q9UKI8 766 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 OPLAHO14841 1288 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 RASSF2P50749 326 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 OTUD4Q01804 1114 aaKnown RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 SPIRE1Q08AE8 756 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 NAA25Q14CX7 972 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 ARL13BQ3SXY8 428 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 GNASQ5JWF2 1037 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 DAB2IPQ5VWQ8 1189 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 MFSD14CQ5VZR4 134 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 SYDE1Q6ZW31 735 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 KDELC2Q7Z4H8 507 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 CDKL3Q8IVW4 592 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 CEP120Q8N960 986 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 SCYL1Q96KG9 808 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 GBA2Q9HCG7 927 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 CHMP2BQ9UQN3 213 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 A0A0G2JND7 137 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 MAP2K7O14733 419 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 VDRP11473 427 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 SLC26A2P50443 739 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 RNF139Q8WU17 664 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 AJAP1Q9UKB5 411 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 UBQLN1Q9UMX0 589 aaKnown RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 NFASCO94856 1347 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 SPATA31C2B4DYI2 1134 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 LSP1P33241 339 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 GTF2A2P52657 109 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 CACNB2Q08289 660 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 MAP7D1Q3KQU3 841 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 MCUQ8NE86 351 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 EPS8L3Q8TE67 593 aaKnown RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 DCTN4Q9UJW0 460 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 MEFVO15553 781 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 PTENP60484 403 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 KLHL38Q2WGJ6 581 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 BRSK2Q8IWQ3 736 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 THEM5Q8N1Q8 247 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 CDC42EP4Q9H3Q1 356 aaKnown RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 TIMM13Q9Y5L4 95 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 ATP9BO43861 1147 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 DEUP1Q05D60 604 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 PALB2Q86YC2 1186 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 MTMR14Q8NCE2 650 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 KREMEN1Q96MU8 473 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 TMEM121Q9BTD3 319 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 EPN3Q9H201 632 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 PABPC3Q9H361 631 aaKnown RBP6.51□□□□□ -1.37
PRKDC-201ENST00000314191 FIS1Q9Y3D6 152 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 SPARCL1Q14515 664 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 PTGISQ16647 500 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 KYAT1Q16773 422 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 GMLQ99445 158 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 C10orf88Q9H8K7 445 aa6.51□□□□□ -1.37
PRKDC-201ENST00000314191 ARHGAP42A6NI28 874 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 CIB2O75838 187 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 ACTR5Q9H9F9 607 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-201ENST00000314191 SNTG2Q9NY99 539 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 ZNF662Q6ZS27 426 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 TRAIPQ9BWF2 469 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 RSAD1Q9HA92 442 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 F8VP50 259 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 TRIM66O15016 1216 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 MAFO75444 373 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-201ENST00000314191 PTPN11Q06124 597 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-201ENST00000314191 PRAMEF19Q5SWL8 479 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.5□□□□□ -1.37
PRKDC-201ENST00000314191 RARGP13631 454 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 RCN2Q14257 317 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 HIF1AQ16665 826 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 TADA2BQ86TJ2 420 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms