RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 CROCCQ5TZA2 2017 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 SYNCRIPO60506 623 aaKnown RBP16.13■□□□□ 0.17
HCFC1-201ENST00000310441 PDE9AO76083 593 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 TGM3Q08188 693 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 ITIH4Q14624 930 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 KIZQ2M2Z5 673 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 EDRF1Q3B7T1 1238 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 C2orf69Q8N8R5 385 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 MUC3BQ9H195 1237 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 CRYMQ14894 314 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 MAN1C1Q9NR34 630 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 CPB1P15086 417 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 MUTP22033 750 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 AGR3Q8TD06 166 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 SIK2Q9H0K1 926 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 CEP152O94986 1710 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 LSP1P33241 339 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 SPATA18Q8TC71 538 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 GTF3C2Q8WUA4 911 aaPredicted RBP16.13■□□□□ 0.17
HCFC1-201ENST00000310441 IL17RAQ96F46 866 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 CEP44Q9C0F1 390 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 ILKAPQ9H0C8 392 aaPredicted RBP16.13■□□□□ 0.17
HCFC1-201ENST00000310441 SERHL2Q9H4I8 314 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 SERHLQ9NQF3 203 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 SSU72P8A0A1W2PR75 194 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 RBP5P82980 135 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 TWF1Q12792 350 aa16.13■□□□□ 0.17
HCFC1-201ENST00000310441 FHDC1Q9C0D6 1143 aaPredicted RBP16.13■□□□□ 0.17
HCFC1-201ENST00000310441 USP10Q14694 798 aaKnown RBP16.12■□□□□ 0.17
HCFC1-201ENST00000310441 KRT74Q7RTS7 529 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 ADCK2Q7Z695 626 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 CCNJLQ8IV13 435 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 DHX40Q8IX18 779 aaKnown RBP16.12■□□□□ 0.17
HCFC1-201ENST00000310441 ELOA2Q8IYF1 753 aaPredicted RBP16.12■□□□□ 0.17
HCFC1-201ENST00000310441 SEC16BQ96JE7 1060 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 NAT9Q9BTE0 207 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 KDM6AO15550 1401 aaPredicted RBP16.12■□□□□ 0.17
HCFC1-201ENST00000310441 ATP1A3P13637 1013 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 CNTFP26441 200 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 PCSK1P29120 753 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 SOAT1P35610 550 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 MAGEA10P43363 369 aaPredicted RBP16.12■□□□□ 0.17
HCFC1-201ENST00000310441 FDFT1P37268 417 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 PDIA5Q14554 519 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 TAF2Q6P1X5 1199 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 RINLQ6ZS11 566 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 ZNF438Q7Z4V0 828 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 ZNF473Q8WTR7 871 aaKnown RBP16.12■□□□□ 0.17
HCFC1-201ENST00000310441 CYP2E1P05181 493 aaPredicted RBP16.12■□□□□ 0.17
HCFC1-201ENST00000310441 PTPN12Q05209 780 aaKnown RBP16.12■□□□□ 0.17
HCFC1-201ENST00000310441 TMEM132DQ14C87 1099 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 PRMT9Q6P2P2 845 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 CASP10Q92851 521 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 GLMNQ92990 594 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 STARD13Q9Y3M8 1113 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 HEATR9A2RTY3 570 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 USP17L8P0C7I0 530 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 CENPAP49450 140 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 SLC16A1P53985 500 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 NAPEPLDQ6IQ20 393 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 COQ7Q99807 217 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 MYLK2Q9H1R3 596 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 TRPM1Q7Z4N2 1603 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 TRIQKQ629K1 86 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 EEPD1Q7L9B9 569 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 CCT8L1PA6NM43 557 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 AIM2O14862 343 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 ADORA2BP29275 332 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 MTA1Q13330 715 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 TSNQ15631 228 aaKnown RBP16.12■□□□□ 0.17
HCFC1-201ENST00000310441 EXD1Q8NHP7 514 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 MMP19Q99542 508 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 RAB6BQ9NRW1 208 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 KLHL11Q9NVR0 708 aa16.12■□□□□ 0.17
HCFC1-201ENST00000310441 H3BMM5 538 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 PMF1Q6P1K2 205 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 SLC7A14Q8TBB6 771 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 VPS33AQ96AX1 596 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 FAM217BQ9NTX9 383 aaPredicted RBP16.11■□□□□ 0.17
HCFC1-201ENST00000310441 ADGRG1Q9Y653 693 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 RHOBTB1O94844 696 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 CSE1LP55060 971 aaKnown RBP16.11■□□□□ 0.17
HCFC1-201ENST00000310441 COX10Q12887 443 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 COBLL1Q53SF7 1204 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 SNRNP48Q6IEG0 339 aaKnown RBP16.11■□□□□ 0.17
HCFC1-201ENST00000310441 SUGP1Q8IWZ8 645 aaKnown RBP16.11■□□□□ 0.17
HCFC1-201ENST00000310441 RAD21L1Q9H4I0 556 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 ADGRA2Q96PE1 1338 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 ANXA9O76027 345 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 GRK3P35626 688 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 C12orf60Q5U649 245 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 FLCNQ8NFG4 579 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 APOL4Q9BPW4 351 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 RGS18Q9NS28 235 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 HERC5Q9UII4 1024 aaKnown RBP16.11■□□□□ 0.17
HCFC1-201ENST00000310441 TGFBR2P37173 567 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 PPP1R36Q96LQ0 422 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 PACSIN1Q9BY11 444 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 ASB14A6NK59 587 aa16.11■□□□□ 0.17
HCFC1-201ENST00000310441 C2orf81A6NN90 581 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms