RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 RFPL2O75678 378 aa21.27■■□□□ 1
VEGFB-201ENST00000309422 GNA14O95837 355 aa21.27■■□□□ 1
VEGFB-201ENST00000309422 ADCY1Q08828 1119 aa21.27■■□□□ 1
VEGFB-201ENST00000309422 WDR72Q3MJ13 1102 aa21.27■■□□□ 1
VEGFB-201ENST00000309422 ZNF667Q5HYK9 610 aa21.27■■□□□ 1
VEGFB-201ENST00000309422 ANKRD40Q6AI12 368 aa21.27■■□□□ 1
VEGFB-201ENST00000309422 FOXR2Q6PJQ5 311 aa21.27■■□□□ 1
VEGFB-201ENST00000309422 PDCL2Q8N4E4 241 aa21.27■■□□□ 1
VEGFB-201ENST00000309422 TDRD5Q8NAT2 981 aaKnown RBP21.27■■□□□ 1
VEGFB-201ENST00000309422 MLKLQ8NB16 471 aa21.27■■□□□ 1
VEGFB-201ENST00000309422 C2orf15Q8WU43 125 aaKnown RBP21.27■■□□□ 1
VEGFB-201ENST00000309422 RPGRIP1Q96KN7 1286 aa21.27■■□□□ 1
VEGFB-201ENST00000309422 SNX25Q9H3E2 840 aa21.27■■□□□ 1
VEGFB-201ENST00000309422 DDX43Q9NXZ2 648 aaKnown RBP21.27■■□□□ 1
VEGFB-201ENST00000309422 ARMCX3Q9UH62 379 aaPredicted RBP21.27■■□□□ 1
VEGFB-201ENST00000309422 SPTBN5Q9NRC6 3674 aaKnown RBP21.27■■□□□ 1
VEGFB-201ENST00000309422 TRIM49BA6NDI0 452 aa21.26■□□□□ 0.99
VEGFB-201ENST00000309422 STAU1O95793 577 aaKnown RBP21.26■□□□□ 0.99
VEGFB-201ENST00000309422 GTF2H1P32780 548 aa21.26■□□□□ 0.99
VEGFB-201ENST00000309422 MXI1P50539 228 aa21.26■□□□□ 0.99
VEGFB-201ENST00000309422 CLDN10P78369 228 aa21.26■□□□□ 0.99
VEGFB-201ENST00000309422 GPR17Q13304 367 aa21.26■□□□□ 0.99
VEGFB-201ENST00000309422 NFE2Q16621 373 aaPredicted RBP21.26■□□□□ 0.99
VEGFB-201ENST00000309422 TDRD10Q5VZ19 366 aaKnown RBP21.26■□□□□ 0.99
VEGFB-201ENST00000309422 IQCEQ6IPM2 695 aa21.26■□□□□ 0.99
VEGFB-201ENST00000309422 RSPO2Q6UXX9 243 aaPredicted RBP21.26■□□□□ 0.99
VEGFB-201ENST00000309422 OTOP3Q7RTS5 596 aa21.26■□□□□ 0.99
VEGFB-201ENST00000309422 GJD3Q8N144 294 aa21.26■□□□□ 0.99
VEGFB-201ENST00000309422 TAF4BQ92750 862 aa21.26■□□□□ 0.99
VEGFB-201ENST00000309422 FAM84AQ96KN4 292 aa21.26■□□□□ 0.99
VEGFB-201ENST00000309422 NXF1Q9UBU9 619 aaKnown RBP21.26■□□□□ 0.99
VEGFB-201ENST00000309422 L1RE1Q9UN81 338 aa21.26■□□□□ 0.99
VEGFB-201ENST00000309422 CCL16O15467 120 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 TBC1D4O60343 1298 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 ABLIM3O94929 683 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 POU2F2P09086 479 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 WEE2P0C1S8 567 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 TRIM49P0CI25 452 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 TRIM49CP0CI26 452 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 PTMSP20962 102 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 ALDH1A3P47895 512 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 ZP2Q05996 745 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 CETN1Q12798 172 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 VEPH1Q14D04 833 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 SGSM1Q2NKQ1 1148 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 ZACNQ401N2 412 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 SLC39A12Q504Y0 691 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 TCEAL8Q8IYN2 117 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 EEF2KMTQ96G04 330 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 PGLYRP2Q96PD5 576 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 COL25A1Q9BXS0 654 aaPredicted RBP21.25■□□□□ 0.99
VEGFB-201ENST00000309422 TMEM8AQ9HCN3 771 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 ANK1P16157 1881 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 CLUHO75153 1309 aa21.25■□□□□ 0.99
VEGFB-201ENST00000309422 DLL1O00548 723 aa21.24■□□□□ 0.99
VEGFB-201ENST00000309422 OR4Q2P0C623 313 aa21.24■□□□□ 0.99
VEGFB-201ENST00000309422 GCLMP48507 274 aa21.24■□□□□ 0.99
VEGFB-201ENST00000309422 MYL6P60660 151 aa21.24■□□□□ 0.99
VEGFB-201ENST00000309422 DLG4P78352 724 aa21.24■□□□□ 0.99
VEGFB-201ENST00000309422 MAPRE1Q15691 268 aaKnown RBP21.24■□□□□ 0.99
VEGFB-201ENST00000309422 KRT39Q6A163 491 aa21.24■□□□□ 0.99
VEGFB-201ENST00000309422 ACBD6Q9BR61 282 aa21.24■□□□□ 0.99
VEGFB-201ENST00000309422 ZCWPW1Q9H0M4 648 aa21.24■□□□□ 0.99
VEGFB-201ENST00000309422 POMKQ9H5K3 350 aa21.24■□□□□ 0.99
VEGFB-201ENST00000309422 INSL5Q9Y5Q6 135 aa21.24■□□□□ 0.99
VEGFB-201ENST00000309422 REV3LO60673 3130 aa21.24■□□□□ 0.99
VEGFB-201ENST00000309422 TNFRSF10AO00220 468 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 N4BP1O75113 896 aaKnown RBP21.23■□□□□ 0.99
VEGFB-201ENST00000309422 C4BPAP04003 597 aaKnown RBP21.23■□□□□ 0.99
VEGFB-201ENST00000309422 CCDC192P0DO97 292 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 TUFMP49411 452 aaKnown RBP21.23■□□□□ 0.99
VEGFB-201ENST00000309422 EPHB3P54753 998 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 TAF12Q16514 161 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 MGAT5BQ3V5L5 792 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 SV2AQ7L0J3 742 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 PLCD3Q8N3E9 789 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 OR6B3Q8NGW1 331 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 CXorf38Q8TB03 319 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 FAM200AQ8TCP9 573 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 SPPL2BQ8TCT7 592 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 BORCS6Q96GS4 357 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 NECAB3Q96P71 396 aaPredicted RBP21.23■□□□□ 0.99
VEGFB-201ENST00000309422 SEPT5Q99719 369 aaPredicted RBP21.23■□□□□ 0.99
VEGFB-201ENST00000309422 WDR6Q9NNW5 1121 aaKnown RBP21.23■□□□□ 0.99
VEGFB-201ENST00000309422 RWDD2AQ9UIY3 292 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 USTQ9Y2C2 406 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 PPP1R3GB7ZBB8 358 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 CD44P16070 742 aaKnown RBP21.23■□□□□ 0.99
VEGFB-201ENST00000309422 SP100P23497 879 aaPredicted RBP21.23■□□□□ 0.99
VEGFB-201ENST00000309422 GBP2P32456 591 aaPredicted RBP21.23■□□□□ 0.99
VEGFB-201ENST00000309422 PMS1P54277 932 aaKnown RBP21.23■□□□□ 0.99
VEGFB-201ENST00000309422 STX17P56962 302 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 WDR44Q5JSH3 913 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 RNF19BQ6ZMZ0 732 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 C4orf50Q6ZRC1 276 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 GET4Q7L5D6 327 aaPredicted RBP21.23■□□□□ 0.99
VEGFB-201ENST00000309422 FRMD5Q7Z6J6 570 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 FILIP1Q7Z7B0 1213 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 ITIH5Q86UX2 942 aa21.23■□□□□ 0.99
VEGFB-201ENST00000309422 SPATA2LQ8IUW3 424 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms