RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 TAP1Q03518 808 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 SAFBQ15424 915 aaKnown RBP eCLIP5.42□□□□□ -1.54
CKS1B-201ENST00000308987 ELF2Q15723 593 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 NTRK3Q16288 839 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 RILPL1Q5EBL4 403 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 SNAP47Q5SQN1 464 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 CCDC174Q6PII3 467 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 APOA5Q6Q788 366 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 SHC4Q6S5L8 630 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 ZPBP2Q6X784 338 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 ZNF771Q7L3S4 317 aaPredicted RBP5.42□□□□□ -1.54
CKS1B-201ENST00000308987 TMCO2Q7Z6W1 182 aaPredicted RBP5.42□□□□□ -1.54
CKS1B-201ENST00000308987 REXO1L1PQ8IX06 675 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 IFNL3Q8IZI9 196 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 ADGRG2Q8IZP9 1017 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 SPATA20Q8TB22 786 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 IGDCC4Q8TDY8 1250 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 UBXN4Q92575 508 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 COPS5Q92905 334 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 MAP3K14Q99558 947 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 NAA15Q9BXJ9 866 aaKnown RBP5.42□□□□□ -1.54
CKS1B-201ENST00000308987 KRT23Q9C075 422 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 HSD3B7Q9H2F3 369 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 FOXP1Q9H334 677 aaPredicted RBP5.42□□□□□ -1.54
CKS1B-201ENST00000308987 ACAD9Q9H845 621 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 SMPD4Q9NXE4 827 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 TRMT1Q9NXH9 659 aaKnown RBP5.42□□□□□ -1.54
CKS1B-201ENST00000308987 CALCOCO1Q9P1Z2 691 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 FBXO40Q9UH90 709 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 TCFL5Q9UL49 500 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.42□□□□□ -1.54
CKS1B-201ENST00000308987 SLC4A7Q9Y6M7 1214 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 V9GYY5 206 aaPredicted RBP5.42□□□□□ -1.54
CKS1B-201ENST00000308987 MYO10Q9HD67 2058 aa5.42□□□□□ -1.54
CKS1B-201ENST00000308987 RIF1Q5UIP0 2472 aaKnown RBP5.41□□□□□ -1.54
CKS1B-201ENST00000308987 RALGAPA2Q2PPJ7 1873 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 A0A1B0GTL3 188 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 FAM86C2PA6NEL3 165 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 ASB14A6NK59 587 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 PATL2C9JE40 543 aaKnown RBP5.41□□□□□ -1.54
CKS1B-201ENST00000308987 MEIS1O00470 390 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 PLA2G6O60733 806 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 CABYRO75952 493 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 SERPINC1P01008 464 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 PNMA6AP0CW24 399 aaPredicted RBP5.41□□□□□ -1.54
CKS1B-201ENST00000308987 ATP2A2P16615 1042 aaKnown RBP5.41□□□□□ -1.54
CKS1B-201ENST00000308987 ZNF18P17022 549 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 IGFBP6P24592 240 aaPredicted RBP5.41□□□□□ -1.54
CKS1B-201ENST00000308987 GBP2P32456 591 aaPredicted RBP5.41□□□□□ -1.54
CKS1B-201ENST00000308987 NOVP48745 357 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 SARSP49591 514 aaKnown RBP5.41□□□□□ -1.54
CKS1B-201ENST00000308987 NT5C2P49902 561 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 PURAQ00577 322 aaKnown RBP5.41□□□□□ -1.54
CKS1B-201ENST00000308987 TFAP4Q01664 338 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 SSRP1Q08945 709 aaKnown RBP5.41□□□□□ -1.54
CKS1B-201ENST00000308987 TMEM62Q0P6H9 643 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 GRB10Q13322 594 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 GNL2Q13823 731 aaKnown RBP5.41□□□□□ -1.54
CKS1B-201ENST00000308987 BAATQ14032 418 aaPredicted RBP5.41□□□□□ -1.54
CKS1B-201ENST00000308987 MORC3Q14149 939 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 SART3Q15020 963 aaKnown RBP5.41□□□□□ -1.54
CKS1B-201ENST00000308987 DUSP28Q4G0W2 176 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 TEX35Q5T0J7 233 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 SPECC1LQ69YQ0 1117 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 IQSEC1Q6DN90 963 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 TMCO3Q6UWJ1 677 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 SYT10Q6XYQ8 523 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 CHST3Q7LGC8 479 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 DEFB128Q7Z7B8 93 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 HOMER1Q86YM7 354 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 TMEM139Q8IV31 216 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 NOSTRINQ8IVI9 506 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 AMOTL1Q8IY63 956 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 CNNM3Q8NE01 707 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 MNS1Q8NEH6 495 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 SYTL5Q8TDW5 730 aaPredicted RBP5.41□□□□□ -1.54
CKS1B-201ENST00000308987 STAG1Q8WVM7 1258 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 CLEC4DQ8WXI8 215 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 RABGGTAQ92696 567 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 CCDC51Q96ER9 411 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 PANX2Q96RD6 677 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 PYM1Q9BRP8 204 aaKnown RBP5.41□□□□□ -1.54
CKS1B-201ENST00000308987 UBXN6Q9BZV1 441 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 SPC25Q9HBM1 224 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 SRPRBQ9Y5M8 271 aaKnown RBP5.41□□□□□ -1.54
CKS1B-201ENST00000308987 FHOD1Q9Y613 1164 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 TNKSO95271 1327 aa5.41□□□□□ -1.54
CKS1B-201ENST00000308987 ZFHX2Q9C0A1 2572 aaPredicted RBP5.4□□□□□ -1.54
CKS1B-201ENST00000308987 DNAH14Q0VDD8 3507 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 VWA3AA6NCI4 1184 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 GOLGA8AA7E2F4 631 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 NUDT19A8MXV4 375 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 ARIH2O95376 493 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 DEXIO95424 95 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 PF4P02776 101 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 MMP1P03956 469 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 ITGB3P05106 788 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 SYPP08247 313 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 IQCF3P0C7M6 154 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 SLC16A2P36021 539 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms