RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 TRIM13O60858 407 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 PAEPP09466 180 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 ITIH2P19823 946 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 SLC5A3P53794 718 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 TMC3Q7Z5M5 1100 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 ELMOD2Q8IZ81 293 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 CSRNP1Q96S65 589 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 TEX12Q9BXU0 123 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 DMGDHQ9UI17 866 aaKnown RBP8.18□□□□□ -1.1
RSF1-201ENST00000308488 LRRC42Q9Y546 428 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 KRT87PA6NCN2 255 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 RTN2O75298 545 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 TPTEP56180 551 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 FAM47AQ5JRC9 791 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 RIPOR1Q6ZS17 1223 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 ARHGAP27Q6ZUM4 889 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 IFNL1Q8IU54 200 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 SDR16C5Q8N3Y7 309 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 POC5Q8NA72 575 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 STARD13Q9Y3M8 1113 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 C2orf74A8MZ97 194 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 THRAP10827 490 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 MYL7Q01449 175 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 PPP2R5DQ14738 602 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 MEI1Q5TIA1 1274 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 TMEM132EQ6IEE7 984 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 PRUNE1Q86TP1 453 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 CIDECQ96AQ7 238 aaPredicted RBP8.18□□□□□ -1.1
RSF1-201ENST00000308488 TUBA1CQ9BQE3 449 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 C9orf16Q9BUW7 83 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 ETNK2Q9NVF9 386 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 ATP9BO43861 1147 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 ABCB1P08183 1280 aaPredicted RBP8.18□□□□□ -1.1
RSF1-201ENST00000308488 USP11P51784 963 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 CCDC142Q17RM4 750 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 DUS1LQ6P1R4 473 aaKnown RBP8.18□□□□□ -1.1
RSF1-201ENST00000308488 AK8Q96MA6 479 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 AP5Z1O43299 807 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 SRP72O76094 671 aaKnown RBP8.18□□□□□ -1.1
RSF1-201ENST00000308488 CYP2C9P11712 490 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 ARL6IP4Q66PJ3 421 aaKnown RBP8.18□□□□□ -1.1
RSF1-201ENST00000308488 OR7A2PQ8NGA2 310 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 ZNF717Q9BY31 904 aaPredicted RBP8.18□□□□□ -1.1
RSF1-201ENST00000308488 SPRTNQ9H040 489 aaPredicted RBP8.18□□□□□ -1.1
RSF1-201ENST00000308488 RTEL1-TNFRSF6BF6WH68 1400 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 ABATP80404 500 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 CTC1Q2NKJ3 1217 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 PIK3C3Q8NEB9 887 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 ABCG2Q9UNQ0 655 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 KPNA1P52294 538 aaPredicted RBP8.18□□□□□ -1.1
RSF1-201ENST00000308488 C4orf22Q6V702 233 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 PPP4R3CPQ6ZMV5 832 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 SYTL1Q8IYJ3 562 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 TTC8Q8TAM2 541 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 RFFLQ8WZ73 363 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 STARD8Q92502 1023 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 RORBQ92753 470 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 OXNAD1Q96HP4 312 aaPredicted RBP8.18□□□□□ -1.1
RSF1-201ENST00000308488 ATP8A2Q9NTI2 1148 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 PFDN2Q9UHV9 154 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 V9GY48 417 aaPredicted RBP8.18□□□□□ -1.1
RSF1-201ENST00000308488 A0A1W2PQJ5 194 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 OXSR1O95747 527 aaPredicted RBP8.18□□□□□ -1.1
RSF1-201ENST00000308488 RFX1P22670 979 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 ATP5OP48047 213 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 DMC1Q14565 340 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 GARNL3Q5VVW2 1013 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 SVOPQ8N4V2 548 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 TINF2Q9BSI4 451 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 CLEC11AQ9Y240 323 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 INPP5FQ9Y2H2 1132 aa8.18□□□□□ -1.1
RSF1-201ENST00000308488 GABBR2O75899 941 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 POLD3Q15054 466 aaPredicted RBP8.17□□□□□ -1.1
RSF1-201ENST00000308488 HIF1AQ16665 826 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 KRT24Q2M2I5 525 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 TTI2Q6NXR4 508 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 SYN2Q92777 582 aaPredicted RBP8.17□□□□□ -1.1
RSF1-201ENST00000308488 MTMR9Q96QG7 549 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 CGREF1Q99674 301 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 POLR3BQ9NW08 1133 aaPredicted RBP8.17□□□□□ -1.1
RSF1-201ENST00000308488 VPS54Q9P1Q0 977 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 ATF6P18850 670 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 MARSP56192 900 aaKnown RBP8.17□□□□□ -1.1
RSF1-201ENST00000308488 PURAQ00577 322 aaKnown RBP8.17□□□□□ -1.1
RSF1-201ENST00000308488 QPRTQ15274 297 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 TTC23LQ6PF05 361 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.17□□□□□ -1.1
RSF1-201ENST00000308488 FAM13CQ8NE31 585 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 PSMA8Q8TAA3 256 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 FAIMQ9NVQ4 179 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 CACNA2D2Q9NY47 1150 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 CRNNQ9UBG3 495 aaPredicted RBP8.17□□□□□ -1.1
RSF1-201ENST00000308488 KANSL1LA0AUZ9 987 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 CCNE2O96020 404 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 PTPREP23469 700 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 HNRNPFP52597 415 aaKnown RBP8.17□□□□□ -1.1
RSF1-201ENST00000308488 TP53BP2Q13625 1128 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 TAF2Q6P1X5 1199 aa8.17□□□□□ -1.1
RSF1-201ENST00000308488 PDZD4Q76G19 769 aaPredicted RBP8.17□□□□□ -1.1
RSF1-201ENST00000308488 PTGDRQ13258 359 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms