RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 KLK14Q9P0G3 267 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.09□□□□□ -0.47
SCG2-201ENST00000305409 GNEQ9Y223 722 aaKnown RBP12.09□□□□□ -0.47
SCG2-201ENST00000305409 R3HDM2Q9Y2K5 976 aaKnown RBP12.09□□□□□ -0.47
SCG2-201ENST00000305409 A0A1B0GUA9 196 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 IL18RAPO95256 599 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 ZNF865P0CJ78 1059 aaPredicted RBP12.09□□□□□ -0.47
SCG2-201ENST00000305409 MYBL1P10243 752 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 RALAP11233 206 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 CYP2C9P11712 490 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 CTGFP29279 349 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 HSD17B3P37058 310 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 PTGIRP43119 386 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 PSMC4P43686 418 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 VPS41P49754 854 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 RAD23BP54727 409 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 ZNF252P-AS1Q0IIN9 211 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 UAP1Q16222 522 aaPredicted RBP12.09□□□□□ -0.47
SCG2-201ENST00000305409 FAM187BQ17R55 369 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 PLEKHA7Q6IQ23 1121 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 DCUN1D2Q6PH85 259 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 C12orf29Q8N999 325 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 FEZF2Q8TBJ5 459 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 WHAMMQ8TF30 809 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 C18orf25Q96B23 403 aaPredicted RBP12.09□□□□□ -0.47
SCG2-201ENST00000305409 DDX27Q96GQ7 796 aaKnown RBP12.09□□□□□ -0.47
SCG2-201ENST00000305409 LPIN3Q9BQK8 851 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 ERP44Q9BS26 406 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 ADAMTS10Q9H324 1103 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 RABEP2Q9H5N1 569 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 PLAAQ9Y263 795 aa12.09□□□□□ -0.47
SCG2-201ENST00000305409 HCRTO43612 131 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 KRT10P13645 584 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 ADCY2Q08462 1091 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 PTPN20Q4JDL3 420 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 SGO2Q562F6 1265 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 FAM182AQ5T1J6 154 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 TRIM72Q6ZMU5 477 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 ERICH1Q86X53 443 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 IQCKQ8N0W5 287 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 MSL3Q8N5Y2 521 aaKnown RBP12.08□□□□□ -0.48
SCG2-201ENST00000305409 EMC1Q8N766 993 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 GOLGA6L1Q8N7Z2 621 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 HEXIM2Q96MH2 286 aaKnown RBP12.08□□□□□ -0.48
SCG2-201ENST00000305409 ADPGKQ9BRR6 497 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 NXF3Q9H4D5 531 aaKnown RBP12.08□□□□□ -0.48
SCG2-201ENST00000305409 DPP3Q9NY33 737 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 ATP8A1Q9Y2Q0 1164 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 MYADML2A6NDP7 307 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 A6NJR5 290 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 GPR32O75388 356 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 IBSPP21815 317 aaPredicted RBP12.08□□□□□ -0.48
SCG2-201ENST00000305409 COILP38432 576 aaPredicted RBP12.08□□□□□ -0.48
SCG2-201ENST00000305409 RPL21P46778 160 aaKnown RBP12.08□□□□□ -0.48
SCG2-201ENST00000305409 C1QBPQ07021 282 aaKnown RBP12.08□□□□□ -0.48
SCG2-201ENST00000305409 DHX9Q08211 1270 aaKnown RBP12.08□□□□□ -0.48
SCG2-201ENST00000305409 CUL1Q13616 776 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 MFSD10Q14728 455 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 DUPD1Q68J44 220 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 DNAJC24Q6P3W2 148 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 SESTD1Q86VW0 696 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 SLC4A11Q8NBS3 891 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 TMEM35BQ8NCS4 154 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 UHMK1Q8TAS1 419 aaKnown RBP12.08□□□□□ -0.48
SCG2-201ENST00000305409 FBXO25Q8TCJ0 367 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 TRIM11Q96F44 468 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 ARHGAP39Q9C0H5 1083 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 PARVAQ9NVD7 372 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 TUBGCP4Q9UGJ1 667 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 GJD2Q9UKL4 321 aa12.08□□□□□ -0.48
SCG2-201ENST00000305409 GOLGA6CA6NDK9 693 aa12.07□□□□□ -0.48
SCG2-201ENST00000305409 GOLGA6DP0CG33 693 aa12.07□□□□□ -0.48
SCG2-201ENST00000305409 CEP85LQ5SZL2 805 aa12.07□□□□□ -0.48
SCG2-201ENST00000305409 IFNLR1Q8IU57 520 aaPredicted RBP12.07□□□□□ -0.48
SCG2-201ENST00000305409 JOSD2Q8TAC2 188 aa12.07□□□□□ -0.48
SCG2-201ENST00000305409 HAUS1Q96CS2 278 aa12.07□□□□□ -0.48
SCG2-201ENST00000305409 CPXM1Q96SM3 734 aa12.07□□□□□ -0.48
SCG2-201ENST00000305409 RNF39Q9H2S5 420 aa12.07□□□□□ -0.48
SCG2-201ENST00000305409 MRPL47Q9HD33 250 aaKnown RBP12.07□□□□□ -0.48
SCG2-201ENST00000305409 DNAJC17Q9NVM6 304 aaKnown RBP12.07□□□□□ -0.48
SCG2-201ENST00000305409 GOLGA6AQ9NYA3 693 aa12.07□□□□□ -0.48
SCG2-201ENST00000305409 BHMG1C9JSJ3 638 aaPredicted RBP12.07□□□□□ -0.48
SCG2-201ENST00000305409 HOXD8P13378 290 aaPredicted RBP12.07□□□□□ -0.48
SCG2-201ENST00000305409 RFC1P35251 1148 aaPredicted RBP12.07□□□□□ -0.48
SCG2-201ENST00000305409 NDST1P52848 882 aa12.07□□□□□ -0.48
SCG2-201ENST00000305409 POU5F1BQ06416 359 aa12.07□□□□□ -0.48
SCG2-201ENST00000305409 SMTNL2Q2TAL5 461 aa12.07□□□□□ -0.48
SCG2-201ENST00000305409 SAPCD2Q86UD0 394 aa12.07□□□□□ -0.48
SCG2-201ENST00000305409 BCO2Q9BYV7 579 aa12.07□□□□□ -0.48
SCG2-201ENST00000305409 SLC5A4Q9NY91 659 aa12.07□□□□□ -0.48
SCG2-201ENST00000305409 MTUS1Q9ULD2 1270 aa12.07□□□□□ -0.48
SCG2-201ENST00000305409 COL1A2P08123 1366 aa12.07□□□□□ -0.48
SCG2-201ENST00000305409 TMEM191CA6NGB0 347 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 TNPO2O14787 897 aaKnown RBP12.06□□□□□ -0.48
SCG2-201ENST00000305409 F2P00734 622 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 CHRNA3P32297 505 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 HSPA9P38646 679 aaKnown RBP12.06□□□□□ -0.48
SCG2-201ENST00000305409 ATP1A2P50993 1020 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 CRHR2Q13324 411 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 NNTQ13423 1086 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms