RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 C3orf70A6NLC5 250 aaPredicted RBP17.14■□□□□ 0.33
BRD3-201ENST00000303407 LAMC2Q13753 1193 aa17.14■□□□□ 0.33
BRD3-201ENST00000303407 DGKDQ16760 1214 aa17.14■□□□□ 0.33
BRD3-201ENST00000303407 ELMOD1Q8N336 334 aa17.14■□□□□ 0.33
BRD3-201ENST00000303407 CGRRF1Q99675 332 aa17.14■□□□□ 0.33
BRD3-201ENST00000303407 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.14■□□□□ 0.331e-9■■□□□ 11.8
BRD3-201ENST00000303407 CYTH3O43739 400 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 GAS2O43903 313 aaKnown RBP17.13■□□□□ 0.33
BRD3-201ENST00000303407 LVRNQ6Q4G3 990 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 ATPAF2Q8N5M1 289 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 SAMD3Q8N6K7 520 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 NCLNQ969V3 563 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 NUDT12Q9BQG2 462 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 EML4Q9HC35 981 aaKnown RBP17.13■□□□□ 0.33
BRD3-201ENST00000303407 TSR3Q9UJK0 312 aaKnown RBP17.13■□□□□ 0.33
BRD3-201ENST00000303407 FAM107AO95990 144 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 RNF219Q5W0B1 726 aaPredicted RBP17.13■□□□□ 0.33
BRD3-201ENST00000303407 TRPM8Q7Z2W7 1104 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 C4orf19Q8IY42 314 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 ZNF507Q8TCN5 953 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 EPS8L3Q8TE67 593 aaKnown RBP17.13■□□□□ 0.33
BRD3-201ENST00000303407 SERPINB12Q96P63 405 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 SMAPO00193 183 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 PSMD3O43242 534 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 ZC3H11AO75152 810 aaKnown RBP eCLIP17.13■□□□□ 0.33
BRD3-201ENST00000303407 PGM1P36871 562 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 HADHAP40939 763 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 KDSRQ06136 332 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 SLC7A14Q8TBB6 771 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 KLF6Q99612 283 aaPredicted RBP17.13■□□□□ 0.33
BRD3-201ENST00000303407 WTIPA6NIX2 430 aaPredicted RBP17.13■□□□□ 0.33
BRD3-201ENST00000303407 AP3B1O00203 1094 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 TRIM66O15016 1216 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 GEMIN4P57678 1058 aaKnown RBP17.13■□□□□ 0.33
BRD3-201ENST00000303407 SH3RF1Q7Z6J0 888 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 TMC2Q8TDI7 906 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 ATP8B4Q8TF62 1192 aa17.13■□□□□ 0.33
BRD3-201ENST00000303407 RGL2O15211 777 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 SPAG6O75602 509 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 GNL1P36915 607 aaPredicted RBP17.12■□□□□ 0.33
BRD3-201ENST00000303407 CTCFP49711 727 aaPredicted RBP17.12■□□□□ 0.33
BRD3-201ENST00000303407 STX3Q13277 289 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 PGM5Q15124 567 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 TAS2R42Q7RTR8 314 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 CYP2W1Q8TAV3 490 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 SYTL5Q8TDW5 730 aaPredicted RBP17.12■□□□□ 0.33
BRD3-201ENST00000303407 RANBP17Q9H2T7 1088 aaKnown RBP17.12■□□□□ 0.33
BRD3-201ENST00000303407 PABPC3Q9H361 631 aaKnown RBP17.12■□□□□ 0.33
BRD3-201ENST00000303407 TMBIM4Q9HC24 238 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 CYP2C9P11712 490 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 ITGA4P13612 1032 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 TRIML2Q8N7C3 387 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 SLC26A7Q8TE54 656 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 SLC4A9Q96Q91 983 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 FAM167BQ9BTA0 163 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 KRT82Q9NSB4 513 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 L1RE1Q9UN81 338 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 GTPBP10A4D1E9 387 aaKnown RBP17.12■□□□□ 0.33
BRD3-201ENST00000303407 OGTO15294 1046 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 RBP3P10745 1247 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 IMPG1Q17R60 797 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 NOTUMQ6P988 496 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 C3P01024 1663 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 SLIT3O75094 1523 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 CCDC78A2IDD5 438 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 HNRNPCL1O60812 293 aaKnown RBP17.12■□□□□ 0.33
BRD3-201ENST00000303407 NFKBIAP25963 317 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 SOX10P56693 466 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 DCAF4L1Q3SXM0 396 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 DCAF6Q58WW2 860 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 LCA5Q86VQ0 697 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 DDIASQ8IXT1 998 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 ASAP3Q8TDY4 903 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 OLA1Q9NTK5 396 aaKnown RBP17.12■□□□□ 0.33
BRD3-201ENST00000303407 BLOC1S4Q9NUP1 217 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 TJP2Q9UDY2 1190 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 PYGBP11216 843 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 TAS1R2Q8TE23 839 aa17.12■□□□□ 0.33
BRD3-201ENST00000303407 SLC12A3P55017 1021 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 TAF1CQ15572 869 aaPredicted RBP17.11■□□□□ 0.33
BRD3-201ENST00000303407 MPZL3Q6UWV2 235 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 RMDN1Q96DB5 314 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 SLC38A7Q9NVC3 462 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 TRAF3IP3Q9Y228 551 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 SMIM22K7EJ46 135 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 RPS6KA5O75582 802 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 RAP1GAPP47736 663 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 AP1ARQ63HQ0 302 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 ANKRD13AQ8IZ07 590 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 MARCOQ9UEW3 520 aaPredicted RBP17.11■□□□□ 0.33
BRD3-201ENST00000303407 H3BQF6 201 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 SLITRK3O94933 977 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 C6orf222P0C671 652 aaPredicted RBP17.11■□□□□ 0.33
BRD3-201ENST00000303407 RECQLP46063 649 aaPredicted RBP17.11■□□□□ 0.33
BRD3-201ENST00000303407 NLRP11P59045 1033 aaKnown RBP17.11■□□□□ 0.33
BRD3-201ENST00000303407 HIC1Q14526 733 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 PDK1Q15118 436 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 CLEC16AQ2KHT3 1053 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 SLC30A10Q6XR72 485 aa17.11■□□□□ 0.33
BRD3-201ENST00000303407 ERP27Q96DN0 273 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms