RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CUL4AQ13619 759 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 FAM196AQ6ZSG2 479 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 BCL2L14Q9BZR8 327 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 CRLS1Q9UJA2 301 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 KCNH4Q9UQ05 1017 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 EIF3LQ9Y262 564 aaKnown RBP10.83□□□□□ -0.68
CLIP1-201ENST00000302528 USP15Q9Y4E8 981 aaPredicted RBP10.83□□□□□ -0.68
CLIP1-201ENST00000302528 AP4S1Q9Y587 144 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 EMSYQ7Z589 1322 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 GSTM1P09488 218 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 CHN1P15882 459 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 PSMA4P25789 261 aaKnown RBP10.83□□□□□ -0.68
CLIP1-201ENST00000302528 POU1F1P28069 291 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 HSPA13P48723 471 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 PTK6Q13882 451 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 BYSLQ13895 437 aaKnown RBP10.83□□□□□ -0.68
CLIP1-201ENST00000302528 MACC1Q6ZN28 852 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 ARHGEF26Q96DR7 871 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 WRNIP1Q96S55 665 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 RBM15Q96T37 977 aaKnown RBP eCLIP10.83□□□□□ -0.68
CLIP1-201ENST00000302528 TUBGCP4Q9UGJ1 667 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 MTO1Q9Y2Z2 717 aaKnown RBP10.83□□□□□ -0.68
CLIP1-201ENST00000302528 TPST1O60507 370 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 GTF2E2P29084 291 aaKnown RBP10.83□□□□□ -0.68
CLIP1-201ENST00000302528 GPSM2P81274 684 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 PTK7Q13308 1070 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 INAQ16352 499 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 FUT11Q495W5 492 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 CACHD1Q5VU97 1274 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 TMC5Q6UXY8 1006 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 ZNF438Q7Z4V0 828 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 GPR141Q7Z602 305 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 PRPF39Q86UA1 669 aaKnown RBP10.83□□□□□ -0.68
CLIP1-201ENST00000302528 MMGT1Q8N4V1 131 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 ERP27Q96DN0 273 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 MED15Q96RN5 788 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 SEPT5Q99719 369 aaPredicted RBP10.83□□□□□ -0.68
CLIP1-201ENST00000302528 KIFC1Q9BW19 673 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 REXO4Q9GZR2 422 aaKnown RBP10.83□□□□□ -0.68
CLIP1-201ENST00000302528 HDHD2Q9H0R4 259 aa10.83□□□□□ -0.68
CLIP1-201ENST00000302528 UNC13BO14795 1591 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 USP17L5A8MUK1 530 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 PDGFRAP16234 1089 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 LIFRP42702 1097 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 PRCPP42785 496 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 RESTQ13127 1097 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 DDX39BQ13838 428 aaKnown RBP10.82□□□□□ -0.68
CLIP1-201ENST00000302528 GSTA3Q16772 222 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 CYP4Z1Q86W10 505 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 RGS18Q9NS28 235 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 CDY2AQ9Y6F7 541 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 CDY1Q9Y6F8 540 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 LOC100653049A0A140TA62 436 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 USP17L15C9J2P7 530 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 USP17L13C9JLJ4 530 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 USP17L11C9JVI0 530 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 USP17L18D6R9N7 530 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 USP17L22D6RA61 530 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 USP17L17D6RBQ6 530 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 USP17L19D6RCP7 530 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 USP17L20D6RJB6 530 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 TNPO2O14787 897 aaKnown RBP10.82□□□□□ -0.68
CLIP1-201ENST00000302528 SOAT2O75908 522 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 KRT34O76011 436 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 FCER1AP12319 257 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 RGS7P49802 495 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 USP17L24Q0WX57 530 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 LONRF1Q17RB8 773 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 WDR72Q3MJ13 1102 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 USP17L6PQ6QN14 398 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 OTOAQ7RTW8 1153 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 AGPAT1Q99943 283 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 TBX22Q9Y458 520 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 CYP51A1Q16850 503 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 COMMD2Q86X83 199 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 IPMKQ8NFU5 416 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 MBD2Q9UBB5 411 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 RTN2O75298 545 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 CDH16O75309 829 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 POLBP06746 335 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 WEE2P0C1S8 567 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 ZNF23P17027 643 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 IL6STP40189 918 aaPredicted RBP10.82□□□□□ -0.68
CLIP1-201ENST00000302528 MDH1P40925 334 aaKnown RBP10.82□□□□□ -0.68
CLIP1-201ENST00000302528 NPEPPSP55786 919 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 CSNK2BP67870 215 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 LRRC8DQ7L1W4 858 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 NT5DC4Q86YG4 428 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 PRRG3Q9BZD7 231 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 RAD21L1Q9H4I0 556 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 KIF28PB7ZC32 967 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 PSMC3P17980 439 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 SERPINH1P50454 418 aaKnown RBP10.82□□□□□ -0.68
CLIP1-201ENST00000302528 ARID5BQ14865 1188 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 STILQ15468 1287 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 SLC7A14Q8TBB6 771 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 XPO6Q96QU8 1125 aaKnown RBP10.82□□□□□ -0.68
CLIP1-201ENST00000302528 TMEM106CQ9BVX2 250 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 AGAP1Q9UPQ3 857 aa10.82□□□□□ -0.68
CLIP1-201ENST00000302528 CENPXA8MT69 81 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms