RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 MAN1A1P33908 653 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 LSAMPQ13449 338 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 MED21Q13503 144 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 PABPC1LQ4VXU2 614 aaKnown RBP11.56□□□□□ -0.56
SNX20-201ENST00000300590 C3orf62Q6ZUJ4 267 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 LCA5Q86VQ0 697 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 TREML1Q86YW5 311 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 ZCCHC9Q8N567 271 aaKnown RBP11.56□□□□□ -0.56
SNX20-201ENST00000300590 GSTCDQ8NEC7 633 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 NAT14Q8WUY8 206 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 OXNAD1Q96HP4 312 aaPredicted RBP11.56□□□□□ -0.56
SNX20-201ENST00000300590 UVRAGQ9P2Y5 699 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 MEIS2O14770 477 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 LPXNO60711 386 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 FDX1P10109 184 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 RARBP10826 455 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 ATP6V1B1P15313 513 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 GRIA2P42262 883 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 PPP4CP60510 307 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 DYNLT1P63172 113 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 BBS9Q3SYG4 887 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 BBOF1Q8ND07 529 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 CEP70Q8NHQ1 597 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 PYROXD1Q8WU10 500 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 SEMA4DQ92854 862 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 SLCO2A1Q92959 643 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 TTC25Q96NG3 672 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 MECRQ9BV79 373 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 TOPORSQ9NS56 1045 aaPredicted RBP11.56□□□□□ -0.56
SNX20-201ENST00000300590 GINM1Q9NU53 330 aa11.56□□□□□ -0.56
SNX20-201ENST00000300590 ZNF142P52746 1687 aaPredicted RBP11.56□□□□□ -0.56
SNX20-201ENST00000300590 SGK1O00141 431 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 HNRNPCL1O60812 293 aaKnown RBP11.55□□□□□ -0.56
SNX20-201ENST00000300590 ASPHQ12797 758 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 ALCAMQ13740 583 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 GSTA3Q16772 222 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 MFSD14BQ5SR56 506 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 MFSD4BQ5TF39 518 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 SYDE1Q6ZW31 735 aaPredicted RBP11.55□□□□□ -0.56
SNX20-201ENST00000300590 C1orf186Q6ZWK4 172 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 PLEKHO2Q8TD55 490 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 AZIN2Q96A70 460 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 AGBL1Q96MI9 1066 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 C11orf70Q9BRQ4 267 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 TMEM121Q9BTD3 319 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 PHACTR1Q9C0D0 580 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 SAE1Q9UBE0 346 aaPredicted RBP11.55□□□□□ -0.56
SNX20-201ENST00000300590 SPATA31A1Q5TZJ5 1347 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 E5RJQ4 531 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 ATP2A1O14983 1001 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 SLITRK3O94933 977 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 MT-ND3P03897 115 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 HNRNPCP07910 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
SNX20-201ENST00000300590 MAGEA8P43361 318 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 MAGEA10P43363 369 aaPredicted RBP11.55□□□□□ -0.56
SNX20-201ENST00000300590 TTLL12Q14166 644 aaPredicted RBP11.55□□□□□ -0.56
SNX20-201ENST00000300590 STXBP4Q6ZWJ1 553 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 SESTD1Q86VW0 696 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 ARID3BQ8IVW6 561 aaPredicted RBP11.55□□□□□ -0.56
SNX20-201ENST00000300590 SMC1BQ8NDV3 1235 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 PPP2R3CQ969Q6 453 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 PAFAH2Q99487 392 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 RANBP17Q9H2T7 1088 aaKnown RBP11.55□□□□□ -0.56
SNX20-201ENST00000300590 KCNK13Q9HB14 408 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 CYP4F11Q9HBI6 524 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 SLC7A8Q9UHI5 535 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 BLOC1S6Q9UL45 172 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 COMMD3-BMI1R4GMX3 469 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 SORBS2O94875 1100 aaKnown RBP11.55□□□□□ -0.56
SNX20-201ENST00000300590 SERPINB6P35237 376 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 IRX4P78413 519 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 DLG1Q12959 904 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 CCNG2Q16589 344 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 GRAMD1BQ3KR37 738 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 MMEL1Q495T6 779 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 SFT2D3Q587I9 215 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 PRPF39Q86UA1 669 aaKnown RBP11.55□□□□□ -0.56
SNX20-201ENST00000300590 RHPN2Q8IUC4 686 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 PALM2Q8IXS6 379 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 ULK2Q8IYT8 1036 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 RNF168Q8IYW5 571 aaPredicted RBP11.55□□□□□ -0.56
SNX20-201ENST00000300590 POU5F2Q8N7G0 328 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 LENG9Q96B70 501 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 NAP1L4Q99733 375 aaKnown RBP11.55□□□□□ -0.56
SNX20-201ENST00000300590 TUBB6Q9BUF5 446 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 SENP1Q9P0U3 644 aa11.55□□□□□ -0.56
SNX20-201ENST00000300590 MTO1Q9Y2Z2 717 aaKnown RBP11.55□□□□□ -0.56
SNX20-201ENST00000300590 DCAF8L1A6NGE4 600 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 EIF3DO15371 548 aaKnown RBP eCLIP11.54□□□□□ -0.56
SNX20-201ENST00000300590 PDE5AO76074 875 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 MFAP3P55082 362 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 GEMIN4P57678 1058 aaKnown RBP11.54□□□□□ -0.56
SNX20-201ENST00000300590 SLC25A3Q00325 362 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 ACAD10Q6JQN1 1059 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 CENPUQ71F23 418 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 FAM71AQ8IYT1 594 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 NME8Q8N427 588 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 DMAC2Q9NW81 257 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 DNALI1O14645 258 aaPredicted RBP11.54□□□□□ -0.56
SNX20-201ENST00000300590 MAGEB3O15480 346 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms