RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 RHOXF2BP0C7M4 288 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 COMTP21964 271 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 MMP8P22894 467 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 CDH5P33151 784 aaPredicted RBP11.17□□□□□ -0.62
COPS2-201ENST00000299259 PAK2Q13177 524 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 ORC1Q13415 861 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 C2CD6Q53TS8 623 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 FBXO47Q5MNV8 452 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 SLC4A11Q8NBS3 891 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 ARRDC4Q8NCT1 418 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 TMEM176AQ96HP8 235 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 RPS6KC1Q96S38 1066 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 RHOXF2Q9BQY4 288 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 ZNF518BQ9C0D4 1074 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 ERVK-5Q9HDB9 667 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 SNX9Q9Y5X1 595 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 ALG6Q9Y672 507 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 PTCH2Q9Y6C5 1203 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 SCINQ9Y6U3 715 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 TSC2P49815 1807 aa11.17□□□□□ -0.62
COPS2-201ENST00000299259 A0A1W2PQ45 241 aaPredicted RBP11.16□□□□□ -0.62
COPS2-201ENST00000299259 A0A1W2PQY0 241 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 PGRMC1O00264 195 aaKnown RBP11.16□□□□□ -0.62
COPS2-201ENST00000299259 DDX3YO15523 660 aaKnown RBP11.16□□□□□ -0.62
COPS2-201ENST00000299259 SPOPO43791 374 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 CEP104O60308 925 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 CAND2O75155 1236 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 CALB1P05937 261 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 GHRP10912 638 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 CYP3A5P20815 502 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 PNPLA4P41247 253 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 NDST1P52848 882 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 PTP4A2Q12974 167 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 TRIM71Q2Q1W2 868 aaKnown RBP11.16□□□□□ -0.62
COPS2-201ENST00000299259 LHX8Q68G74 356 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 CCDC70Q6NSX1 233 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 UBE2Q2Q8WVN8 375 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 BTBD6Q96KE9 485 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 PARD6BQ9BYG5 372 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 CARD9Q9H257 536 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 AGO3Q9H9G7 860 aaKnown RBP11.16□□□□□ -0.62
COPS2-201ENST00000299259 MRPL47Q9HD33 250 aaKnown RBP11.16□□□□□ -0.62
COPS2-201ENST00000299259 RNF19AQ9NV58 838 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 TRIM17Q9Y577 477 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 TANC1Q9C0D5 1861 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 ITGA4P13612 1032 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 CD52P31358 61 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 MLH1P40692 756 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 RAB27AP51159 221 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 SOX4Q06945 474 aaPredicted RBP11.16□□□□□ -0.62
COPS2-201ENST00000299259 PLEKHA7Q6IQ23 1121 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 LLGL2Q6P1M3 1020 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 DENND1BQ6P3S1 775 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 MTERF4Q7Z6M4 381 aaKnown RBP11.16□□□□□ -0.62
COPS2-201ENST00000299259 MMGT1Q8N4V1 131 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 UBL4BQ8N7F7 174 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 ACTRT1Q8TDG2 376 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 ZFP42Q96MM3 310 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 NT5C1AQ9BXI3 368 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 WNT8AQ9H1J5 351 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 LHX5Q9H2C1 402 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 STARD7Q9NQZ5 370 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 RBM12Q9NTZ6 932 aaKnown RBP11.16□□□□□ -0.62
COPS2-201ENST00000299259 PADI3Q9ULW8 664 aa11.16□□□□□ -0.62
COPS2-201ENST00000299259 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.16□□□□□ -0.62
COPS2-201ENST00000299259 A0A0U1RQG5 324 aaPredicted RBP11.15□□□□□ -0.62
COPS2-201ENST00000299259 M0QYV0 167 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 PIRO00625 290 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 PTGESO14684 152 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 VDRP11473 427 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 CLCN6P51797 869 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 LPIN1Q14693 890 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 SV2CQ496J9 727 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 SGO2Q562F6 1265 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 FAM26DQ5JW98 314 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 DCAF12L1Q5VU92 463 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 PHLDB2Q86SQ0 1253 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 RASGEF1CQ8N431 466 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 USP38Q8NB14 1042 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 PPP1R10Q96QC0 940 aaKnown RBP11.15□□□□□ -0.62
COPS2-201ENST00000299259 PNKPQ96T60 521 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.15□□□□□ -0.62
COPS2-201ENST00000299259 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.15□□□□□ -0.62
COPS2-201ENST00000299259 GOLGA2P5Q9HBQ8 144 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 SLC38A7Q9NVC3 462 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 PARVAQ9NVD7 372 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 STRIP2Q9ULQ0 834 aa11.15□□□□□ -0.62
COPS2-201ENST00000299259 TARSL2A2RTX5 802 aaKnown RBP11.14□□□□□ -0.63
COPS2-201ENST00000299259 CCDC66A2RUB6 948 aa11.14□□□□□ -0.63
COPS2-201ENST00000299259 KBTBD13C9JR72 458 aa11.14□□□□□ -0.63
COPS2-201ENST00000299259 MYO1FO00160 1098 aa11.14□□□□□ -0.63
COPS2-201ENST00000299259 O00370 1275 aa11.14□□□□□ -0.63
COPS2-201ENST00000299259 MICAL2O94851 1124 aa11.14□□□□□ -0.63
COPS2-201ENST00000299259 CTNNA2P26232 953 aa11.14□□□□□ -0.63
COPS2-201ENST00000299259 CTNNA1P35221 906 aaKnown RBP11.14□□□□□ -0.63
COPS2-201ENST00000299259 MARCKSL1P49006 195 aa11.14□□□□□ -0.63
COPS2-201ENST00000299259 TAF6P49848 677 aa11.14□□□□□ -0.63
COPS2-201ENST00000299259 RNASE9P60153 205 aaKnown RBP11.14□□□□□ -0.63
COPS2-201ENST00000299259 MAMLD1Q13495 774 aa11.14□□□□□ -0.63
COPS2-201ENST00000299259 DNAJC24Q6P3W2 148 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms