RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 TMEM270Q6UE05 265 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 ARID3BQ8IVW6 561 aaPredicted RBP12.01□□□□□ -0.49
TRUB1-201ENST00000298746 MCOLN2Q8IZK6 566 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 PDIK1LQ8N165 341 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 ATP11CQ8NB49 1132 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 PHC3Q8NDX5 983 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 OLIG1Q8TAK6 271 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 LMO3Q8TAP4 145 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 DCAF4Q8WV16 495 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 NMD3Q96D46 503 aaKnown RBP12.01□□□□□ -0.49
TRUB1-201ENST00000298746 PRR11Q96HE9 360 aaPredicted RBP12.01□□□□□ -0.49
TRUB1-201ENST00000298746 NDNQ99608 321 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 SHCBP1LQ9BZQ2 653 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 UNC45AQ9H3U1 944 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 CYP4F11Q9HBI6 524 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 DMAC2Q9NW81 257 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 SAE1Q9UBE0 346 aaPredicted RBP12.01□□□□□ -0.49
TRUB1-201ENST00000298746 CHMP2BQ9UQN3 213 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 MTO1Q9Y2Z2 717 aaKnown RBP12.01□□□□□ -0.49
TRUB1-201ENST00000298746 ADAMTSL3P82987 1691 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.01□□□□□ -0.49
TRUB1-201ENST00000298746 FAM237BA0A1B0GVD1 139 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 DNALI1O14645 258 aaPredicted RBP12.01□□□□□ -0.49
TRUB1-201ENST00000298746 ARL4CP56559 192 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 CLEC16AQ2KHT3 1053 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 CEP55Q53EZ4 464 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 PLEKHG4Q58EX7 1191 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 ABTB1Q969K4 478 aaPredicted RBP12.01□□□□□ -0.49
TRUB1-201ENST00000298746 HIC2Q96JB3 615 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 TRAPPC9Q96Q05 1148 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 CCNL1Q9UK58 526 aaPredicted RBP12.01□□□□□ -0.49
TRUB1-201ENST00000298746 EXOC7Q9UPT5 735 aa12.01□□□□□ -0.49
TRUB1-201ENST00000298746 ARAP2Q8WZ64 1704 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 ZNF335Q9H4Z2 1342 aaPredicted RBP12□□□□□ -0.49
TRUB1-201ENST00000298746 TCEA3O75764 348 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 ADRB2P07550 413 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 ZNF394Q53GI3 561 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 MTHFD1LQ6UB35 978 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 ALYREFQ86V81 257 aaKnown RBP12□□□□□ -0.49
TRUB1-201ENST00000298746 ZFPM1Q8IX07 1006 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 SH3TC2Q8TF17 1288 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 NRG4Q8WWG1 115 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 SHC3Q92529 594 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 OPTNQ96CV9 577 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 TRIM11Q96F44 468 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 ACAP3Q96P50 834 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 WDR18Q9BV38 432 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 ZWILCHQ9H900 591 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 ZNF219Q9P2Y4 722 aaPredicted RBP12□□□□□ -0.49
TRUB1-201ENST00000298746 COPEO14579 308 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 P4HA2O15460 535 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 PRPF4O43172 522 aaKnown RBP eCLIP12□□□□□ -0.49
TRUB1-201ENST00000298746 PROSCO94903 275 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 LYNP07948 512 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 OCRLQ01968 901 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 AP1B1Q10567 949 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 FAM182AQ5T1J6 154 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 SCUBE1Q8IWY4 988 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 ARHGAP18Q8N392 663 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
TRUB1-201ENST00000298746 FAM213AQ9BRX8 229 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 RHBDL2Q9NX52 303 aa12□□□□□ -0.49
TRUB1-201ENST00000298746 IRF6O14896 467 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 TP73O15350 636 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 GH2P01242 217 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 MED21Q13503 144 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 PRPF39Q86UA1 669 aaKnown RBP11.99□□□□□ -0.49
TRUB1-201ENST00000298746 PPM1NQ8N819 430 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 CFAP36Q96G28 342 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 NMUR2Q9GZQ4 415 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 WRAP73Q9P2S5 460 aaPredicted RBP11.99□□□□□ -0.49
TRUB1-201ENST00000298746 STX18Q9P2W9 335 aaKnown RBP11.99□□□□□ -0.49
TRUB1-201ENST00000298746 ZNF212Q9UDV6 495 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 TM4SF1P30408 202 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 CDK16Q00536 496 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 GABPAQ06546 454 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 PTK7Q13308 1070 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 TRAPPC3LQ5T215 181 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 OLFML2BQ68BL8 750 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 OR52E8Q6IFG1 317 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 CDC42EP5Q6NZY7 148 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 MFSD7Q6UXD7 560 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 FBXO36Q8NEA4 188 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 FAM81AQ8TBF8 368 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 DDX27Q96GQ7 796 aaKnown RBP11.99□□□□□ -0.49
TRUB1-201ENST00000298746 OXNAD1Q96HP4 312 aaPredicted RBP11.99□□□□□ -0.49
TRUB1-201ENST00000298746 RBM41Q96IZ5 413 aaKnown RBP11.99□□□□□ -0.49
TRUB1-201ENST00000298746 PCMTD2Q9NV79 361 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 ANKRD36CQ5JPF3 1778 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 UBE4BO95155 1302 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 IQANK1A0A1B0GTG1 560 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 DENND3A2RUS2 1198 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 MTA2O94776 668 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 ASPHQ12797 758 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 FAM98CQ17RN3 349 aaKnown RBP11.99□□□□□ -0.49
TRUB1-201ENST00000298746 SMTNL2Q2TAL5 461 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 KLHL38Q2WGJ6 581 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 SV2AQ7L0J3 742 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 CPXCR1Q8N123 301 aa11.99□□□□□ -0.49
TRUB1-201ENST00000298746 SLCO2A1Q92959 643 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms