RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 PAX3P23760 479 aa26.26■■□□□ 1.79
GTF2A1-201ENST00000298173 NDST1P52848 882 aa26.26■■□□□ 1.79
GTF2A1-201ENST00000298173 DCLRE1AQ6PJP8 1040 aa26.26■■□□□ 1.79
GTF2A1-201ENST00000298173 KIAA1328Q86T90 577 aa26.26■■□□□ 1.79
GTF2A1-201ENST00000298173 RSPH1Q8WYR4 309 aa26.26■■□□□ 1.79
GTF2A1-201ENST00000298173 RABGGTAQ92696 567 aa26.26■■□□□ 1.79
GTF2A1-201ENST00000298173 TMEM176AQ96HP8 235 aa26.26■■□□□ 1.79
GTF2A1-201ENST00000298173 ISCUQ9H1K1 167 aa26.26■■□□□ 1.79
GTF2A1-201ENST00000298173 RRAGDQ9NQL2 400 aaPredicted RBP26.26■■□□□ 1.79
GTF2A1-201ENST00000298173 L1RE1Q9UN81 338 aa26.26■■□□□ 1.79
GTF2A1-201ENST00000298173 ATP8B3O60423 1300 aa26.26■■□□□ 1.79
GTF2A1-201ENST00000298173 UNC93AQ86WB7 457 aa26.25■■□□□ 1.79
GTF2A1-201ENST00000298173 APPL2Q8NEU8 664 aa26.25■■□□□ 1.79
GTF2A1-201ENST00000298173 TFAP2BQ92481 460 aa26.25■■□□□ 1.79
GTF2A1-201ENST00000298173 SENP8Q96LD8 212 aa26.25■■□□□ 1.79
GTF2A1-201ENST00000298173 LZTFL1Q9NQ48 299 aa26.25■■□□□ 1.79
GTF2A1-201ENST00000298173 TAS2R14Q9NYV8 317 aa26.25■■□□□ 1.79
GTF2A1-201ENST00000298173 CYB561D2O14569 222 aa26.25■■□□□ 1.79
GTF2A1-201ENST00000298173 HUS1O60921 280 aa26.25■■□□□ 1.79
GTF2A1-201ENST00000298173 GATMP50440 423 aa26.25■■□□□ 1.79
GTF2A1-201ENST00000298173 ABI1Q8IZP0 508 aa26.25■■□□□ 1.79
GTF2A1-201ENST00000298173 NT5C1AQ9BXI3 368 aa26.25■■□□□ 1.79
GTF2A1-201ENST00000298173 PACSIN1Q9BY11 444 aa26.25■■□□□ 1.79
GTF2A1-201ENST00000298173 LUC7LQ9NQ29 371 aaKnown RBP26.25■■□□□ 1.79
GTF2A1-201ENST00000298173 INTUQ9ULD6 942 aa26.25■■□□□ 1.79
GTF2A1-201ENST00000298173 THAP12O43422 761 aa26.24■■□□□ 1.79
GTF2A1-201ENST00000298173 B3GAT3O94766 335 aa26.24■■□□□ 1.79
GTF2A1-201ENST00000298173 CYP1A1P04798 512 aaPredicted RBP26.24■■□□□ 1.79
GTF2A1-201ENST00000298173 CFHP08603 1231 aa26.24■■□□□ 1.79
GTF2A1-201ENST00000298173 UNGP13051 313 aaPredicted RBP26.24■■□□□ 1.79
GTF2A1-201ENST00000298173 TIGD5Q53EQ6 642 aa26.24■■□□□ 1.79
GTF2A1-201ENST00000298173 PDCL2Q8N4E4 241 aa26.24■■□□□ 1.79
GTF2A1-201ENST00000298173 IL23AQ9NPF7 189 aa26.24■■□□□ 1.79
GTF2A1-201ENST00000298173 SEPT11Q9NVA2 429 aaKnown RBP26.24■■□□□ 1.79
GTF2A1-201ENST00000298173 PCDHGC3Q9UN70 934 aa26.24■■□□□ 1.79
GTF2A1-201ENST00000298173 GABRDO14764 452 aa26.23■■□□□ 1.79
GTF2A1-201ENST00000298173 WARSP23381 471 aaKnown RBP26.23■■□□□ 1.79
GTF2A1-201ENST00000298173 KIF5AQ12840 1032 aa26.23■■□□□ 1.79
GTF2A1-201ENST00000298173 DNAAF5Q86Y56 855 aa26.23■■□□□ 1.79
GTF2A1-201ENST00000298173 TOP1MTQ969P6 601 aa26.23■■□□□ 1.79
GTF2A1-201ENST00000298173 NRDE2Q9H7Z3 1164 aa26.23■■□□□ 1.79
GTF2A1-201ENST00000298173 TRIM10Q9UDY6 481 aa26.23■■□□□ 1.79
GTF2A1-201ENST00000298173 KIAA1257Q9ULG3 409 aa26.23■■□□□ 1.79
GTF2A1-201ENST00000298173 DUSP10Q9Y6W6 482 aa26.23■■□□□ 1.79
GTF2A1-201ENST00000298173 TMEM189-UBE2V1I3L0A0 370 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 EFCAB14O75071 495 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 RTN2O75298 545 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 BRD2P25440 801 aaKnown RBP26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 GNL1P36915 607 aaPredicted RBP26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 ORC1Q13415 861 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 CLEC16AQ2KHT3 1053 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 ARHGAP29Q52LW3 1261 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 C16orf59Q7L2K0 433 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 TXLNBQ8N3L3 684 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 PCDH10Q9P2E7 1040 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 DNAJB4Q9UDY4 337 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 STXBP5LQ9Y2K9 1186 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 M0QZQ0 153 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 KRT86O43790 486 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 DGKIO75912 1065 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 H2AFZP0C0S5 128 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 VDRP11473 427 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 GALCP54803 685 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 RNASELQ05823 741 aaKnown RBP26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 PTPN14Q15678 1187 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 TRIM72Q6ZMU5 477 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 H2AFVQ71UI9 128 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 CRYBG2Q8N1P7 616 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 OR6B3Q8NGW1 331 aa26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 PUF60Q9UHX1 559 aaKnown RBP26.22■■□□□ 1.79
GTF2A1-201ENST00000298173 FTLP02792 175 aaPredicted RBP26.21■■□□□ 1.79
GTF2A1-201ENST00000298173 ITGB1P05556 798 aa26.21■■□□□ 1.79
GTF2A1-201ENST00000298173 ACRP10323 421 aa26.21■■□□□ 1.79
GTF2A1-201ENST00000298173 LMO2P25791 158 aa26.21■■□□□ 1.79
GTF2A1-201ENST00000298173 WSCD1Q658N2 575 aa26.21■■□□□ 1.79
GTF2A1-201ENST00000298173 ACAD10Q6JQN1 1059 aa26.21■■□□□ 1.79
GTF2A1-201ENST00000298173 OSTM1Q86WC4 334 aa26.21■■□□□ 1.79
GTF2A1-201ENST00000298173 ADGRF2Q8IZF7 708 aa26.21■■□□□ 1.79
GTF2A1-201ENST00000298173 TMEM86AQ8N2M4 240 aa26.21■■□□□ 1.79
GTF2A1-201ENST00000298173 CYFIP2Q96F07 1278 aa26.21■■□□□ 1.79
GTF2A1-201ENST00000298173 C16orf45Q96MC5 204 aaPredicted RBP26.21■■□□□ 1.79
GTF2A1-201ENST00000298173 HEXIM2Q96MH2 286 aaKnown RBP26.21■■□□□ 1.79
GTF2A1-201ENST00000298173 FAM193BQ96PV7 902 aaPredicted RBP26.21■■□□□ 1.79
GTF2A1-201ENST00000298173 MRPL9Q9BYD2 267 aaKnown RBP26.21■■□□□ 1.79
GTF2A1-201ENST00000298173 TSGA10Q9BZW7 698 aa26.21■■□□□ 1.79
GTF2A1-201ENST00000298173 COL4A6Q14031 1691 aa26.2■■□□□ 1.78
GTF2A1-201ENST00000298173 TMCO5BA8MYB1 307 aa26.2■■□□□ 1.78
GTF2A1-201ENST00000298173 BAIAP3O94812 1187 aa26.2■■□□□ 1.78
GTF2A1-201ENST00000298173 KIF4AO95239 1232 aa26.2■■□□□ 1.78
GTF2A1-201ENST00000298173 BRCC3P46736 316 aa26.2■■□□□ 1.78
GTF2A1-201ENST00000298173 CNGA2Q16280 664 aa26.2■■□□□ 1.78
GTF2A1-201ENST00000298173 DSTYKQ6XUX3 929 aa26.2■■□□□ 1.78
GTF2A1-201ENST00000298173 IRX2Q9BZI1 471 aaPredicted RBP26.2■■□□□ 1.78
GTF2A1-201ENST00000298173 PRKAG2Q9UGJ0 569 aa26.2■■□□□ 1.78
GTF2A1-201ENST00000298173 ANKRD62A6NC57 917 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 TBKBP1A7MCY6 615 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 BTNL10A8MVZ5 291 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 A8MXQ7 604 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 F8W810 466 aa26.19■■□□□ 1.78
GTF2A1-201ENST00000298173 CYP11A1P05108 521 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms