RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ARL2P36404 184 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 SGSM1Q2NKQ1 1148 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 TXNRD3NBQ6F5E7 133 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.85□□□□□ -0.83
PRDM9-201ENST00000296682 CCDC89Q8N998 374 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 TFAP2BQ92481 460 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 FAM149B1Q96BN6 582 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 TMEM121Q9BTD3 319 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 NIF3L1Q9GZT8 377 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 TUT1Q9H6E5 874 aaKnown RBP9.85□□□□□ -0.83
PRDM9-201ENST00000296682 SMYD3Q9H7B4 428 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 SAYSD1Q9NPB0 183 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 PCDHA3Q9Y5H8 950 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 DNAH12Q6ZR08 3092 aa9.85□□□□□ -0.83
PRDM9-201ENST00000296682 GPR25O00155 361 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 KIAA0391O15091 583 aaKnown RBP9.84□□□□□ -0.83
PRDM9-201ENST00000296682 RNF8O76064 485 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 MTA2O94776 668 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 TBXAS1P24557 533 aaPredicted RBP9.84□□□□□ -0.83
PRDM9-201ENST00000296682 PHKA2P46019 1235 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 NRLP54845 237 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 BASP1P80723 227 aaKnown RBP9.84□□□□□ -0.83
PRDM9-201ENST00000296682 P3H1Q32P28 736 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 DENND1BQ6P3S1 775 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 MFSD7Q6UXD7 560 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 ENOSF1Q7L5Y1 443 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 HOOK3Q86VS8 718 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 HVCN1Q96D96 273 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 C12orf42Q96LP6 360 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 LPIN3Q9BQK8 851 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 PARVAQ9NVD7 372 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 GPATCH2LQ9NWQ4 482 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 NFASCO94856 1347 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 WDR91A4D1P6 747 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 PODXLO00592 558 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 MAFO75444 373 aaPredicted RBP9.84□□□□□ -0.83
PRDM9-201ENST00000296682 CELF2O95319 508 aaKnown RBP9.84□□□□□ -0.83
PRDM9-201ENST00000296682 SLC25A27O95847 323 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 ADORA2BP29275 332 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 ARSEP51690 589 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 MAMLD1Q13495 774 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 IZUMO3Q5VZ72 239 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 JADE1Q6IE81 842 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 C1orf228Q6PIY5 440 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 SRRM1Q8IYB3 904 aaKnown RBP9.84□□□□□ -0.83
PRDM9-201ENST00000296682 OR6J1Q8NGC5 347 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 RSAD2Q8WXG1 361 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 ACO2Q99798 780 aaKnown RBP9.84□□□□□ -0.83
PRDM9-201ENST00000296682 HERPUD2Q9BSE4 406 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 METTL5Q9NRN9 209 aaKnown RBP9.84□□□□□ -0.83
PRDM9-201ENST00000296682 INTS9Q9NV88 658 aaKnown RBP9.84□□□□□ -0.83
PRDM9-201ENST00000296682 ATP2A1O14983 1001 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 EIF3HO15372 352 aaKnown RBP eCLIP9.84□□□□□ -0.83
PRDM9-201ENST00000296682 HBP1O60381 514 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 NPTXRO95502 500 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 MYL3P08590 195 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 CTSHP09668 335 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 RFC1P35251 1148 aaPredicted RBP9.84□□□□□ -0.83
PRDM9-201ENST00000296682 CHKAP35790 457 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 MDH1P40925 334 aaKnown RBP9.84□□□□□ -0.83
PRDM9-201ENST00000296682 NUMBP49757 651 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 TMED2Q15363 201 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 SPDYCQ5MJ68 293 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 CHADLQ6NUI6 762 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 MPZL3Q6UWV2 235 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 ACOT1Q86TX2 421 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 PDLIM7Q9NR12 457 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 FAM169AQ9Y6X4 670 aa9.84□□□□□ -0.83
PRDM9-201ENST00000296682 HMGB1P1B2RPK0 211 aaPredicted RBP9.83□□□□□ -0.84
PRDM9-201ENST00000296682 H7C0C1 242 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 TULP2O00295 520 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 SPAG7O75391 227 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 BANF1O75531 89 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 LGALS2P05162 132 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 HSPA9P38646 679 aaKnown RBP9.83□□□□□ -0.84
PRDM9-201ENST00000296682 ATP5OP48047 213 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 GCLCP48506 637 aaPredicted RBP9.83□□□□□ -0.84
PRDM9-201ENST00000296682 CLDN10P78369 228 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 BEX3Q00994 111 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 POU5F1Q01860 360 aaKnown RBP9.83□□□□□ -0.84
PRDM9-201ENST00000296682 ADCY2Q08462 1091 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 BBS9Q3SYG4 887 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 EFCAB13Q8IY85 973 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 PIK3R5Q8WYR1 880 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 HPDLQ96IR7 371 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 RPS6KC1Q96S38 1066 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 CCT8L2Q96SF2 557 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 CDT1Q9H211 546 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 MROH7Q68CQ1 1323 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 SRRM3A6NNA2 597 aaPredicted RBP9.83□□□□□ -0.84
PRDM9-201ENST00000296682 PROSCO94903 275 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 TGFB3P10600 412 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 PEX5P50542 639 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 PPP2R2AP63151 447 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 NOMO3P69849 1222 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 DHX34Q14147 1143 aaKnown RBP9.83□□□□□ -0.84
PRDM9-201ENST00000296682 PPP2R5EQ16537 467 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 FAXCQ5TGI0 409 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 BRSK2Q8IWQ3 736 aa9.83□□□□□ -0.84
PRDM9-201ENST00000296682 IPO4Q8TEX9 1081 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms