RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 ARID3BQ8IVW6 561 aaPredicted RBP21.21■□□□□ 0.99
CXCL3-201ENST00000296026 CSGALNACT1Q8TDX6 532 aa21.21■□□□□ 0.99
CXCL3-201ENST00000296026 POMGNT1Q8WZA1 660 aa21.21■□□□□ 0.99
CXCL3-201ENST00000296026 NELL1Q92832 810 aa21.21■□□□□ 0.99
CXCL3-201ENST00000296026 SEPT5Q99719 369 aaPredicted RBP21.21■□□□□ 0.99
CXCL3-201ENST00000296026 PYM1Q9BRP8 204 aaKnown RBP21.21■□□□□ 0.99
CXCL3-201ENST00000296026 ZCWPW1Q9H0M4 648 aa21.21■□□□□ 0.99
CXCL3-201ENST00000296026 CHRDQ9H2X0 955 aa21.21■□□□□ 0.99
CXCL3-201ENST00000296026 ATXN3LQ9H3M9 355 aa21.21■□□□□ 0.99
CXCL3-201ENST00000296026 SRPRBQ9Y5M8 271 aaKnown RBP21.21■□□□□ 0.99
CXCL3-201ENST00000296026 SCN1AP35498 2009 aa21.21■□□□□ 0.99
CXCL3-201ENST00000296026 ARNTLO00327 626 aa21.2■□□□□ 0.98
CXCL3-201ENST00000296026 PPP1R37O75864 691 aa21.2■□□□□ 0.98
CXCL3-201ENST00000296026 FGF19O95750 216 aa21.2■□□□□ 0.98
CXCL3-201ENST00000296026 CCNE1P24864 410 aa21.2■□□□□ 0.98
CXCL3-201ENST00000296026 GABRR2P28476 465 aa21.2■□□□□ 0.98
CXCL3-201ENST00000296026 ADSSP30520 456 aa21.2■□□□□ 0.98
CXCL3-201ENST00000296026 TUFMP49411 452 aaKnown RBP21.2■□□□□ 0.98
CXCL3-201ENST00000296026 POU5F1Q01860 360 aaKnown RBP21.2■□□□□ 0.98
CXCL3-201ENST00000296026 POSTNQ15063 836 aa21.2■□□□□ 0.98
CXCL3-201ENST00000296026 RRAGBQ5VZM2 374 aa21.2■□□□□ 0.98
CXCL3-201ENST00000296026 THEM5Q8N1Q8 247 aa21.2■□□□□ 0.98
CXCL3-201ENST00000296026 FAM200AQ8TCP9 573 aa21.2■□□□□ 0.98
CXCL3-201ENST00000296026 RMDN1Q96DB5 314 aa21.2■□□□□ 0.98
CXCL3-201ENST00000296026 CLIC6Q96NY7 704 aa21.2■□□□□ 0.98
CXCL3-201ENST00000296026 MKNK1Q9BUB5 465 aa21.2■□□□□ 0.98
CXCL3-201ENST00000296026 STRA6Q9BX79 667 aa21.2■□□□□ 0.98
CXCL3-201ENST00000296026 MRPL44Q9H9J2 332 aaKnown RBP21.2■□□□□ 0.98
CXCL3-201ENST00000296026 LMAN1LQ9HAT1 526 aa21.2■□□□□ 0.98
CXCL3-201ENST00000296026 EP300Q09472 2414 aaPredicted RBP21.2■□□□□ 0.98
CXCL3-201ENST00000296026 ZNF292O60281 2723 aa21.2■□□□□ 0.98
CXCL3-201ENST00000296026 MYMKA6NI61 221 aa21.19■□□□□ 0.98
CXCL3-201ENST00000296026 CHADO15335 359 aa21.19■□□□□ 0.98
CXCL3-201ENST00000296026 LILRB5O75023 590 aa21.19■□□□□ 0.98
CXCL3-201ENST00000296026 TXLNAP40222 546 aa21.19■□□□□ 0.98
CXCL3-201ENST00000296026 CEBPZQ03701 1054 aaKnown RBP21.19■□□□□ 0.98
CXCL3-201ENST00000296026 KCNA1Q09470 495 aa21.19■□□□□ 0.98
CXCL3-201ENST00000296026 FCHO2Q0JRZ9 810 aa21.19■□□□□ 0.98
CXCL3-201ENST00000296026 RESTQ13127 1097 aa21.19■□□□□ 0.98
CXCL3-201ENST00000296026 MGAT5BQ3V5L5 792 aa21.19■□□□□ 0.98
CXCL3-201ENST00000296026 GPR158Q5T848 1215 aa21.19■□□□□ 0.98
CXCL3-201ENST00000296026 FAM173BQ6P4H8 233 aa21.19■□□□□ 0.98
CXCL3-201ENST00000296026 SV2BQ7L1I2 683 aa21.19■□□□□ 0.98
CXCL3-201ENST00000296026 EFCAB13Q8IY85 973 aa21.19■□□□□ 0.98
CXCL3-201ENST00000296026 LPIN3Q9BQK8 851 aa21.19■□□□□ 0.98
CXCL3-201ENST00000296026 TBC1D7Q9P0N9 293 aa21.19■□□□□ 0.98
CXCL3-201ENST00000296026 NCDNQ9UBB6 729 aa21.19■□□□□ 0.98
CXCL3-201ENST00000296026 SEL1LQ9UBV2 794 aa21.19■□□□□ 0.98
CXCL3-201ENST00000296026 TCHHQ07283 1943 aa21.18■□□□□ 0.98
CXCL3-201ENST00000296026 DPYSL4O14531 572 aa21.18■□□□□ 0.98
CXCL3-201ENST00000296026 IL18RAPO95256 599 aa21.18■□□□□ 0.98
CXCL3-201ENST00000296026 GAP43P17677 238 aa21.18■□□□□ 0.98
CXCL3-201ENST00000296026 ATF6P18850 670 aa21.18■□□□□ 0.98
CXCL3-201ENST00000296026 MLLT6P55198 1093 aaPredicted RBP21.18■□□□□ 0.98
CXCL3-201ENST00000296026 VEPH1Q14D04 833 aa21.18■□□□□ 0.98
CXCL3-201ENST00000296026 ARHGAP15Q53QZ3 475 aa21.18■□□□□ 0.98
CXCL3-201ENST00000296026 WSCD1Q658N2 575 aa21.18■□□□□ 0.98
CXCL3-201ENST00000296026 MAMSTRQ6ZN01 415 aa21.18■□□□□ 0.98
CXCL3-201ENST00000296026 DNAJC19Q96DA6 116 aa21.18■□□□□ 0.98
CXCL3-201ENST00000296026 IER2Q9BTL4 223 aa21.18■□□□□ 0.98
CXCL3-201ENST00000296026 FAM126AQ9BYI3 521 aaPredicted RBP21.18■□□□□ 0.98
CXCL3-201ENST00000296026 EXOC7Q9UPT5 735 aa21.18■□□□□ 0.98
CXCL3-201ENST00000296026 SLC38A8A6NNN8 435 aa21.17■□□□□ 0.98
CXCL3-201ENST00000296026 KPNA7A9QM74 516 aa21.17■□□□□ 0.98
CXCL3-201ENST00000296026 TULP1O00294 542 aaPredicted RBP21.17■□□□□ 0.98
CXCL3-201ENST00000296026 CHRNB1P11230 501 aa21.17■□□□□ 0.98
CXCL3-201ENST00000296026 SYT1P21579 422 aa21.17■□□□□ 0.98
CXCL3-201ENST00000296026 KPNA1P52294 538 aaPredicted RBP21.17■□□□□ 0.98
CXCL3-201ENST00000296026 SV2CQ496J9 727 aa21.17■□□□□ 0.98
CXCL3-201ENST00000296026 L1TD1Q5T7N2 865 aaKnown RBP21.17■□□□□ 0.98
CXCL3-201ENST00000296026 LRRTM3Q86VH5 581 aa21.17■□□□□ 0.98
CXCL3-201ENST00000296026 NT5DC4Q86YG4 428 aa21.17■□□□□ 0.98
CXCL3-201ENST00000296026 C2orf15Q8WU43 125 aaKnown RBP21.17■□□□□ 0.98
CXCL3-201ENST00000296026 MSANTD3Q96H12 275 aa21.17■□□□□ 0.98
CXCL3-201ENST00000296026 LRRC3BQ96PB8 259 aa21.17■□□□□ 0.98
CXCL3-201ENST00000296026 ACCSQ96QU6 501 aa21.17■□□□□ 0.98
CXCL3-201ENST00000296026 FAM213AQ9BRX8 229 aa21.17■□□□□ 0.98
CXCL3-201ENST00000296026 EPC1Q9H2F5 836 aa21.17■□□□□ 0.98
CXCL3-201ENST00000296026 NUP210Q8TEM1 1887 aaPredicted RBP21.17■□□□□ 0.98
CXCL3-201ENST00000296026 OTOGLQ3ZCN5 2332 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 GCNT3O95395 438 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 TDGF1P13385 188 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 SOX9P48436 509 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 WNT7BP56706 349 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 CYP4F8P98187 520 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 PPP2R5DQ14738 602 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 TAF12Q16514 161 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 ZSWIM2Q8NEG5 633 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 SPPL2BQ8TCT7 592 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 GIPC2Q8TF65 315 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 SAAL1Q96ER3 474 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 ZFYVE19Q96K21 471 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 ZNF560Q96MR9 790 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 TASP1Q9H6P5 420 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 C8orf33Q9H7E9 229 aaPredicted RBP21.16■□□□□ 0.98
CXCL3-201ENST00000296026 IL21Q9HBE4 155 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 OBP2AQ9NY56 170 aa21.16■□□□□ 0.98
CXCL3-201ENST00000296026 SMG5Q9UPR3 1016 aaKnown RBP21.16■□□□□ 0.98
CXCL3-201ENST00000296026 F5P12259 2224 aa21.15■□□□□ 0.98
CXCL3-201ENST00000296026 PRAMEF12O95522 483 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms