RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 CAGE1Q8TC20 777 aa24.31■■□□□ 1.48
PTX3-201ENST00000295927 LPPQ93052 612 aa24.31■■□□□ 1.48
PTX3-201ENST00000295927 PPP1R10Q96QC0 940 aaKnown RBP24.31■■□□□ 1.48
PTX3-201ENST00000295927 AVENQ9NQS1 362 aaPredicted RBP24.31■■□□□ 1.48
PTX3-201ENST00000295927 PAK6Q9NQU5 681 aaPredicted RBP24.31■■□□□ 1.48
PTX3-201ENST00000295927 AMFRQ9UKV5 643 aa24.31■■□□□ 1.48
PTX3-201ENST00000295927 RRM1P23921 792 aa24.31■■□□□ 1.48
PTX3-201ENST00000295927 NDST1P52848 882 aa24.31■■□□□ 1.48
PTX3-201ENST00000295927 MTFR1Q15390 333 aa24.31■■□□□ 1.48
PTX3-201ENST00000295927 TEX35Q5T0J7 233 aa24.31■■□□□ 1.48
PTX3-201ENST00000295927 TRAF7Q6Q0C0 670 aa24.31■■□□□ 1.48
PTX3-201ENST00000295927 C11orf70Q9BRQ4 267 aa24.31■■□□□ 1.48
PTX3-201ENST00000295927 TRAIPQ9BWF2 469 aa24.31■■□□□ 1.48
PTX3-201ENST00000295927 ADAM22Q9P0K1 906 aa24.31■■□□□ 1.48
PTX3-201ENST00000295927 DNM1LO00429 736 aa24.3■■□□□ 1.48
PTX3-201ENST00000295927 MED7O43513 233 aa24.3■■□□□ 1.48
PTX3-201ENST00000295927 MLH1P40692 756 aa24.3■■□□□ 1.48
PTX3-201ENST00000295927 PTP4A2Q12974 167 aa24.3■■□□□ 1.48
PTX3-201ENST00000295927 C11orf63Q6NUN7 778 aa24.3■■□□□ 1.48
PTX3-201ENST00000295927 AGMOQ6ZNB7 445 aa24.3■■□□□ 1.48
PTX3-201ENST00000295927 TMEM35BQ8NCS4 154 aa24.3■■□□□ 1.48
PTX3-201ENST00000295927 GSTCDQ8NEC7 633 aa24.3■■□□□ 1.48
PTX3-201ENST00000295927 VCPIP1Q96JH7 1222 aa24.3■■□□□ 1.48
PTX3-201ENST00000295927 GAD1Q99259 594 aa24.3■■□□□ 1.48
PTX3-201ENST00000295927 CDH5P33151 784 aaPredicted RBP24.29■■□□□ 1.48
PTX3-201ENST00000295927 PHLDB2Q86SQ0 1253 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 WDTC1Q8N5D0 677 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 C1orf131Q8NDD1 294 aaKnown RBP24.29■■□□□ 1.48
PTX3-201ENST00000295927 HES6Q96HZ4 224 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 ZNF560Q96MR9 790 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 DEFB118Q96PH6 123 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 MRPL45Q9BRJ2 306 aaKnown RBP24.29■■□□□ 1.48
PTX3-201ENST00000295927 ZNF518BQ9C0D4 1074 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 GIT1Q9Y2X7 761 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 ALG6Q9Y672 507 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 ZNF623O75123 536 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 PNPLA4P41247 253 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 RAB27AP51159 221 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 C1QBPQ07021 282 aaKnown RBP24.29■■□□□ 1.48
PTX3-201ENST00000295927 MESDQ14696 234 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 LIN9Q5TKA1 542 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 LLGL2Q6P1M3 1020 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 DENND1BQ6P3S1 775 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 MMS22LQ6ZRQ5 1243 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 ADAM2Q99965 735 aa24.29■■□□□ 1.48
PTX3-201ENST00000295927 TMEM110-MUSTN1A8MSY1 372 aa24.28■■□□□ 1.48
PTX3-201ENST00000295927 KPNA7A9QM74 516 aa24.28■■□□□ 1.48
PTX3-201ENST00000295927 KCNK3O14649 394 aa24.28■■□□□ 1.48
PTX3-201ENST00000295927 SPTLC1O15269 473 aa24.28■■□□□ 1.48
PTX3-201ENST00000295927 MMP8P22894 467 aa24.28■■□□□ 1.48
PTX3-201ENST00000295927 LRPAP1P30533 357 aa24.28■■□□□ 1.48
PTX3-201ENST00000295927 TAF6P49848 677 aa24.28■■□□□ 1.48
PTX3-201ENST00000295927 CDK7P50613 346 aa24.28■■□□□ 1.48
PTX3-201ENST00000295927 BTBD6Q96KE9 485 aa24.28■■□□□ 1.48
PTX3-201ENST00000295927 HEXIM2Q96MH2 286 aaKnown RBP24.28■■□□□ 1.48
PTX3-201ENST00000295927 RPS6KC1Q96S38 1066 aa24.28■■□□□ 1.48
PTX3-201ENST00000295927 NT5C1AQ9BXI3 368 aa24.28■■□□□ 1.48
PTX3-201ENST00000295927 WBP1LQ9NX94 342 aa24.28■■□□□ 1.48
PTX3-201ENST00000295927 MIOSQ9NXC5 875 aa24.28■■□□□ 1.48
PTX3-201ENST00000295927 EHD2Q9NZN4 543 aa24.28■■□□□ 1.48
PTX3-201ENST00000295927 CEP83Q9Y592 693 aa24.28■■□□□ 1.48
PTX3-201ENST00000295927 A0A0U1RQF3 1178 aa24.27■■□□□ 1.48
PTX3-201ENST00000295927 VDRP11473 427 aa24.27■■□□□ 1.48
PTX3-201ENST00000295927 AFF1P51825 1210 aaKnown RBP24.27■■□□□ 1.48
PTX3-201ENST00000295927 MBTPS1Q14703 1052 aa24.27■■□□□ 1.48
PTX3-201ENST00000295927 SOWAHAQ2M3V2 549 aa24.27■■□□□ 1.48
PTX3-201ENST00000295927 CCDC181Q5TID7 509 aa24.27■■□□□ 1.48
PTX3-201ENST00000295927 MS4A14Q96JA4 679 aa24.27■■□□□ 1.48
PTX3-201ENST00000295927 LHX5Q9H2C1 402 aa24.27■■□□□ 1.48
PTX3-201ENST00000295927 GDAP2Q9NXN4 497 aa24.27■■□□□ 1.48
PTX3-201ENST00000295927 SMARCAL1Q9NZC9 954 aa24.27■■□□□ 1.48
PTX3-201ENST00000295927 ARL5CA6NH57 179 aa24.27■■□□□ 1.48
PTX3-201ENST00000295927 CCL5P13501 91 aa24.27■■□□□ 1.48
PTX3-201ENST00000295927 ANKRD7Q92527 254 aa24.27■■□□□ 1.48
PTX3-201ENST00000295927 RABGGTAQ92696 567 aa24.27■■□□□ 1.48
PTX3-201ENST00000295927 RPGRIP1Q96KN7 1286 aa24.27■■□□□ 1.48
PTX3-201ENST00000295927 SLC38A7Q9NVC3 462 aa24.27■■□□□ 1.48
PTX3-201ENST00000295927 RNF14Q9UBS8 474 aa24.27■■□□□ 1.48
PTX3-201ENST00000295927 CES2O00748 559 aa24.26■■□□□ 1.47
PTX3-201ENST00000295927 THP07101 528 aa24.26■■□□□ 1.47
PTX3-201ENST00000295927 SV2CQ496J9 727 aa24.26■■□□□ 1.47
PTX3-201ENST00000295927 ZNF572Q7Z3I7 529 aaPredicted RBP24.26■■□□□ 1.47
PTX3-201ENST00000295927 NOA1Q8NC60 698 aaKnown RBP24.26■■□□□ 1.47
PTX3-201ENST00000295927 RNF169Q8NCN4 708 aa24.26■■□□□ 1.47
PTX3-201ENST00000295927 PBKQ96KB5 322 aa24.26■■□□□ 1.47
PTX3-201ENST00000295927 SEZ6LQ9BYH1 1024 aa24.26■■□□□ 1.47
PTX3-201ENST00000295927 RNF208Q9H0X6 261 aa24.26■■□□□ 1.47
PTX3-201ENST00000295927 IBSPP21815 317 aaPredicted RBP24.25■■□□□ 1.47
PTX3-201ENST00000295927 PAFAH1B1P43034 410 aa24.25■■□□□ 1.47
PTX3-201ENST00000295927 TUBB4BP68371 445 aa24.25■■□□□ 1.47
PTX3-201ENST00000295927 CNGA2Q16280 664 aa24.25■■□□□ 1.47
PTX3-201ENST00000295927 SGO2Q562F6 1265 aa24.25■■□□□ 1.47
PTX3-201ENST00000295927 EPC1Q9H2F5 836 aa24.25■■□□□ 1.47
PTX3-201ENST00000295927 ANAPC7Q9UJX3 599 aa24.25■■□□□ 1.47
PTX3-201ENST00000295927 OGDHLQ9ULD0 1010 aa24.25■■□□□ 1.47
PTX3-201ENST00000295927 KIAA1257Q9ULG3 409 aa24.25■■□□□ 1.47
PTX3-201ENST00000295927 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.25■■□□□ 1.47
PTX3-201ENST00000295927 NME7Q9Y5B8 376 aa24.25■■□□□ 1.47
PTX3-201ENST00000295927 CEP350Q5VT06 3117 aa24.25■■□□□ 1.47
PTX3-201ENST00000295927 O00370 1275 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms