RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 KATNBL1Q9H079 304 aa9.83□□□□□ -0.84
CLRN1-201ENST00000295911 CDT1Q9H211 546 aa9.83□□□□□ -0.84
CLRN1-201ENST00000295911 ABHD16BQ9H3Z7 469 aa9.83□□□□□ -0.84
CLRN1-201ENST00000295911 PLEKHA4Q9H4M7 779 aa9.83□□□□□ -0.84
CLRN1-201ENST00000295911 ASB7Q9H672 318 aa9.83□□□□□ -0.84
CLRN1-201ENST00000295911 TUT1Q9H6E5 874 aaKnown RBP9.83□□□□□ -0.84
CLRN1-201ENST00000295911 LRRC19Q9H756 370 aa9.83□□□□□ -0.84
CLRN1-201ENST00000295911 IFT122Q9HBG6 1241 aa9.83□□□□□ -0.84
CLRN1-201ENST00000295911 GBA2Q9HCG7 927 aaPredicted RBP9.83□□□□□ -0.84
CLRN1-201ENST00000295911 CISHQ9NSE2 258 aa9.83□□□□□ -0.84
CLRN1-201ENST00000295911 IP6K2Q9UHH9 426 aa9.83□□□□□ -0.84
CLRN1-201ENST00000295911 PCDHGC3Q9UN70 934 aa9.83□□□□□ -0.84
CLRN1-201ENST00000295911 AKT3Q9Y243 479 aa9.83□□□□□ -0.84
CLRN1-201ENST00000295911 PCDHB3Q9Y5E6 796 aa9.83□□□□□ -0.84
CLRN1-201ENST00000295911 RRN3P2A6NIE6 340 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 SLC15A5A6NIM6 579 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 SNAI1O95863 264 aaPredicted RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 CALCAP01258 141 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 PAEPP09466 180 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 HOXD8P13378 290 aaPredicted RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 MMP8P22894 467 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 ECHS1P30084 290 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 POLR2BP30876 1174 aaKnown RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 CDH5P33151 784 aaPredicted RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 COILP38432 576 aaPredicted RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 PTGIRP43119 386 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 MARCKSL1P49006 195 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 IGBP1P78318 339 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 MAMLD1Q13495 774 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 TRADDQ15628 312 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 DGKDQ16760 1214 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 FAM110CQ1W6H9 321 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 ZNF667Q5HYK9 610 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 SPRYD7Q5W111 196 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 MAP1SQ66K74 1059 aaPredicted RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 CCDC137Q6PK04 289 aaKnown RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 BLOC1S3Q6QNY0 202 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 MTHFD1LQ6UB35 978 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 LEKR1Q6ZMV7 388 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 RUFY4Q6ZNE9 571 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 GPR142Q7Z601 462 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 ADAT2Q7Z6V5 191 aaKnown RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 PLEKHH3Q7Z736 793 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 ZNF410Q86VK4 478 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 DDX42Q86XP3 938 aaKnown RBP eCLIP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 JAMLQ86YT9 394 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 TTC39CQ8N584 583 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 GRK7Q8WTQ7 553 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 RIN2Q8WYP3 895 aaPredicted RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 SLCO2A1Q92959 643 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 MAML3Q96JK9 1138 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 FAM84AQ96KN4 292 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 FMO2Q99518 471 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 C16orf70Q9BSU1 422 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 CELF4Q9BZC1 486 aaKnown RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 PRKD2Q9BZL6 878 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 LHX5Q9H2C1 402 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 CYP3A43Q9HB55 503 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 ERVK-5Q9HDB9 667 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 MTRF1LQ9UGC7 380 aaKnown RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 CHORDC1Q9UHD1 332 aaPredicted RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 STRIP2Q9ULQ0 834 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 NR2E1Q9Y466 385 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 UMODL1Q5DID0 1318 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 PDCD11Q14690 1871 aaKnown RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 A0A087WZ62 844 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 FAM170AA1A519 330 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 HMGB1P1B2RPK0 211 aaPredicted RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 GPR25O00155 361 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 TLR3O15455 904 aaKnown RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 B4GALT5O43286 388 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 RPS6KA5O75582 802 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 GJB1P08034 283 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 SLC10A3P09131 477 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 STAG3L1P0CL83 205 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 RARAP10276 462 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 CAPN2P17655 700 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 HSD17B3P37058 310 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 ADCYAP1R1P41586 468 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 EIF3BP55884 814 aaKnown RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 ACVR2BQ13705 512 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 PCBP1Q15365 356 aaKnown RBP eCLIP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 TMEM63BQ5T3F8 832 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 EEF1DP3Q658K8 133 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 MMS22LQ6ZRQ5 1243 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 PASD1Q8IV76 773 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 CCDC105Q8IYK2 499 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 KATNAL2Q8IYT4 538 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 OR6J1Q8NGC5 347 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 PIK3R5Q8WYR1 880 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 FDXACB1Q9BRP7 624 aaPredicted RBP9.82□□□□□ -0.84
CLRN1-201ENST00000295911 C11orf70Q9BRQ4 267 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 ADPGKQ9BRR6 497 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 TINF2Q9BSI4 451 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 TRIM51Q9BSJ1 452 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 BCO2Q9BYV7 579 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 XYLT2Q9H1B5 865 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 DPH5Q9H2P9 285 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 MINDY3Q9H8M7 445 aa9.82□□□□□ -0.84
CLRN1-201ENST00000295911 VRTNQ9H8Y1 702 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms