RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 ZWILCHQ9H900 591 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 CNOT10Q9H9A5 744 aaKnown RBP16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 SAE1Q9UBE0 346 aaPredicted RBP16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 PPP2R3BQ9Y5P8 575 aa16.74■□□□□ 0.27
NCKIPSD-201ENST00000294129 PIK3R2O00459 728 aa16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 FAM189A1O60320 539 aa16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 ITIH2P19823 946 aa16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 LACTBP83111 547 aaPredicted RBP16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 C1QBPQ07021 282 aaKnown RBP16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 ZNF252P-AS1Q0IIN9 211 aa16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 KLF1Q13351 362 aaPredicted RBP16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 PTK6Q13882 451 aa16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 KCNT1Q5JUK3 1230 aa16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 EFCAB12Q6NXP0 572 aa16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 KAT2BQ92831 832 aa16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 IP6K2Q9UHH9 426 aa16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 GOLGA6L7A0A1B0GV03 622 aa16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 ZBTB42B2RXF5 422 aa16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 TXNP10599 105 aaKnown RBP16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 PLCB4Q15147 1175 aa16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 WDR72Q3MJ13 1102 aa16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 ATF7IP2Q5U623 682 aa16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 ERICH1Q86X53 443 aa16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 CACNA2D3Q8IZS8 1091 aa16.73■□□□□ 0.27
NCKIPSD-201ENST00000294129 ERMARDQ5T6L9 678 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 CCDC121Q6ZUS5 278 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 TMEM35BQ8NCS4 154 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 ARHGEF2Q92974 986 aaKnown RBP16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 CHMP6Q96FZ7 201 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 MMP19Q99542 508 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 FAM129AQ9BZQ8 928 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 PTPRFP10586 1907 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 WDR90Q96KV7 1748 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 AGTP01019 485 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 MMP13P45452 471 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 SPRED3Q2MJR0 410 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 CELF3Q5SZQ8 465 aaKnown RBP16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 GKAP1Q5VSY0 366 aaPredicted RBP16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 DENND1BQ6P3S1 775 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 EXOC3L1Q86VI1 746 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 KATNAL2Q8IYT4 538 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 EMC1Q8N766 993 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 TRAIPQ9BWF2 469 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 SYNCQ9H7C4 482 aa16.72■□□□□ 0.27
NCKIPSD-201ENST00000294129 CNMDO75829 334 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 TNNC2P02585 160 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 HOXC6P09630 235 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 TGFB3P10600 412 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 CETN2P41208 172 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 ENPEPQ07075 957 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 MXD4Q14582 209 aaPredicted RBP16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 SGSM1Q2NKQ1 1148 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 TRMT10CQ7L0Y3 403 aaKnown RBP16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 EXD1Q8NHP7 514 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 GDAP1Q8TB36 358 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 FAM167AQ96KS9 214 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 RNPEPQ9H4A4 650 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 CPSF3Q9UKF6 684 aaKnown RBP16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 CEP83Q9Y592 693 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 TMEM191CA6NGB0 347 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 GOLGA8MH3BSY2 632 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 SOCS7O14512 581 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 IQCF3P0C7M6 154 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 DRD4P21917 467 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 IREB2P48200 963 aaKnown RBP16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 RHBDF2Q6PJF5 856 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 LRRC34Q8IZ02 419 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 WDTC1Q8N5D0 677 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 TCP11Q8WWU5 503 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 VCPIP1Q96JH7 1222 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 JPH2Q9BR39 696 aaPredicted RBP16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 NINJ2Q9NZG7 142 aa16.71■□□□□ 0.27
NCKIPSD-201ENST00000294129 TTC4O95801 387 aa16.71■□□□□ 0.26
NCKIPSD-201ENST00000294129 CPP00450 1065 aa16.71■□□□□ 0.26
NCKIPSD-201ENST00000294129 NFICP08651 508 aa16.71■□□□□ 0.26
NCKIPSD-201ENST00000294129 MAN1A1P33908 653 aa16.71■□□□□ 0.26
NCKIPSD-201ENST00000294129 ZNF132P52740 706 aa16.71■□□□□ 0.26
NCKIPSD-201ENST00000294129 CCNG2Q16589 344 aa16.71■□□□□ 0.26
NCKIPSD-201ENST00000294129 MPZL3Q6UWV2 235 aa16.71■□□□□ 0.26
NCKIPSD-201ENST00000294129 PPP1R13LQ8WUF5 828 aa16.71■□□□□ 0.26
NCKIPSD-201ENST00000294129 ATXN2LQ8WWM7 1075 aaKnown RBP16.71■□□□□ 0.26
NCKIPSD-201ENST00000294129 SLCO2A1Q92959 643 aa16.71■□□□□ 0.26
NCKIPSD-201ENST00000294129 ANKRD36BP1Q96IX9 119 aa16.71■□□□□ 0.26
NCKIPSD-201ENST00000294129 CPB2Q96IY4 423 aa16.71■□□□□ 0.26
NCKIPSD-201ENST00000294129 FGD4Q96M96 766 aa16.71■□□□□ 0.26
NCKIPSD-201ENST00000294129 SLITRK1Q96PX8 696 aa16.71■□□□□ 0.26
NCKIPSD-201ENST00000294129 RBPJLQ9UBG7 517 aa16.71■□□□□ 0.26
NCKIPSD-201ENST00000294129 ARSEP51690 589 aa16.7■□□□□ 0.26
NCKIPSD-201ENST00000294129 MKRN3Q13064 507 aaKnown RBP16.7■□□□□ 0.26
NCKIPSD-201ENST00000294129 CCDC89Q8N998 374 aa16.7■□□□□ 0.26
NCKIPSD-201ENST00000294129 ELAC2Q9BQ52 826 aaKnown RBP16.7■□□□□ 0.26
NCKIPSD-201ENST00000294129 TMEM121Q9BTD3 319 aa16.7■□□□□ 0.26
NCKIPSD-201ENST00000294129 RNF181Q9P0P0 153 aa16.7■□□□□ 0.26
NCKIPSD-201ENST00000294129 HMGXB4Q9UGU5 601 aa16.7■□□□□ 0.26
NCKIPSD-201ENST00000294129 PCSK1NQ9UHG2 260 aa16.7■□□□□ 0.26
NCKIPSD-201ENST00000294129 AGTPBP1Q9UPW5 1226 aa16.7■□□□□ 0.26
NCKIPSD-201ENST00000294129 GINS2Q9Y248 185 aa16.7■□□□□ 0.26
NCKIPSD-201ENST00000294129 CALB1P05937 261 aa16.7■□□□□ 0.26
NCKIPSD-201ENST00000294129 CYP2C8P10632 490 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms