RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 V9GYQ6 96 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 USP17L5A8MUK1 530 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 RGS5O15539 181 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 AP5Z1O43299 807 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 RTN2O75298 545 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 DDX5P17844 614 aaKnown RBP11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 PHKA2P46019 1235 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 SERPINB9P50453 376 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 TAP1Q03518 808 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 IYDQ6PHW0 289 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 ZNF786Q8N393 782 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 CLMNQ96JQ2 1002 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 FAM167AQ96KS9 214 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 RMDN3Q96TC7 470 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 FAM217BQ9NTX9 383 aaPredicted RBP11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 LINC00854A0A1B0GVQ3 168 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 TLR2O60603 784 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 SLC9A1P19634 815 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 NNMTP40261 264 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 PTK7Q13308 1070 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 MAPRE1Q15691 268 aaKnown RBP11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 UGP2Q16851 508 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 KIZQ2M2Z5 673 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 SUPT20HL1Q3ZLR7 823 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 AASDHQ4L235 1098 aaPredicted RBP11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 ANKRD40Q6AI12 368 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 TMEM47Q9BQJ4 181 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 IL1RL2Q9HB29 575 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 DTNAQ9Y4J8 743 aa11.23□□□□□ -0.61
PKNOX1-201ENST00000291547 C3orf70A6NLC5 250 aaPredicted RBP11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 GALCP54803 685 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 TWF2Q6IBS0 349 aaKnown RBP11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 FOXP4Q8IVH2 680 aaPredicted RBP11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 DIS3LQ8TF46 1054 aaKnown RBP11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 EZH1Q92800 747 aaPredicted RBP11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 FAM162AQ96A26 154 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 TRAPPC9Q96Q05 1148 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 TBC1D22BQ9NU19 505 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 SMARCAL1Q9NZC9 954 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 IL1RAPL1Q9NZN1 696 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 MPP6Q9NZW5 540 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 A8MXQ7 604 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 DFFAO00273 331 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 NT5C2P49902 561 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 KPNB1Q14974 876 aaKnown RBP11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 PKN3Q6P5Z2 889 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 OSBPL10Q9BXB5 764 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 HPS4Q9NQG7 708 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 AP4S1Q9Y587 144 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 E7ENQ6 273 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 WEE2P0C1S8 567 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 ZCCHC18P0CG32 403 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 GRK2P25098 689 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 MCAMP43121 646 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 ACCSLQ4AC99 568 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 PRR5LQ6MZQ0 368 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 RASGRP2Q7LDG7 609 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 SETD3Q86TU7 594 aaPredicted RBP11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 TLK2Q86UE8 772 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 CCDC60Q8IWA6 550 aaPredicted RBP11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 RCOR2Q8IZ40 523 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 SLC35G2Q8TBE7 412 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 ASAP3Q8TDY4 903 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 AFG1LQ8WV93 481 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 TRIM8Q9BZR9 551 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 ZCWPW1Q9H0M4 648 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 NDUFA13Q9P0J0 144 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 CDYLQ9Y232 598 aa11.22□□□□□ -0.61
PKNOX1-201ENST00000291547 SNAP23O00161 211 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 RAD51CO43502 376 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 MYL2P10916 166 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 HSD17B4P51659 736 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 KRT76Q01546 638 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 RCN1Q15293 331 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 CYB5R4Q7L1T6 521 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 JAMLQ86YT9 394 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 SIKE1Q9BRV8 207 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 ROPN1BQ9BZX4 212 aaPredicted RBP11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 PPCSQ9HAB8 311 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 ROPN1Q9HAT0 212 aaPredicted RBP11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 CNGB3Q9NQW8 809 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 MRGBPQ9NV56 204 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 TMEM260Q9NX78 707 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 ZNF189O75820 626 aaPredicted RBP11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 GH2P01242 217 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 SNRPAP09012 282 aaKnown RBP11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 HIST1H2AGP0C0S8 130 aaPredicted RBP11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 CYP2D6P10635 497 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 HIST1H2ADP20671 130 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 QARSP47897 775 aaKnown RBP11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 RAD51Q06609 339 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 PDAP1Q13442 181 aaKnown RBP11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 INAQ16352 499 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 CENPPQ6IPU0 288 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 TMEM179Q6ZVK1 233 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 FRMD5Q7Z6J6 570 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 TTC39CQ8N584 583 aa11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 DRAXINQ8NBI3 349 aaPredicted RBP11.21□□□□□ -0.61
PKNOX1-201ENST00000291547 FLCNQ8NFG4 579 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms