RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 RAP1GAPP47736 663 aa12.26□□□□□ -0.45
CHRNB3-201ENST00000289957 NAB2Q15742 525 aa12.26□□□□□ -0.45
CHRNB3-201ENST00000289957 PAN2Q504Q3 1202 aaKnown RBP12.26□□□□□ -0.45
CHRNB3-201ENST00000289957 FAM117BQ6P1L5 589 aa12.26□□□□□ -0.45
CHRNB3-201ENST00000289957 DNAAF5Q86Y56 855 aa12.26□□□□□ -0.45
CHRNB3-201ENST00000289957 HELQQ8TDG4 1101 aa12.26□□□□□ -0.45
CHRNB3-201ENST00000289957 TLR10Q9BXR5 811 aa12.26□□□□□ -0.45
CHRNB3-201ENST00000289957 XYLT2Q9H1B5 865 aa12.26□□□□□ -0.45
CHRNB3-201ENST00000289957 TSPYL2Q9H2G4 693 aaPredicted RBP12.26□□□□□ -0.45
CHRNB3-201ENST00000289957 CHST12Q9NRB3 414 aa12.26□□□□□ -0.45
CHRNB3-201ENST00000289957 RGS18Q9NS28 235 aa12.26□□□□□ -0.45
CHRNB3-201ENST00000289957 ZMYND8Q9ULU4 1186 aaPredicted RBP12.26□□□□□ -0.45
CHRNB3-201ENST00000289957 COQ4Q9Y3A0 265 aa12.26□□□□□ -0.45
CHRNB3-201ENST00000289957 PCDHGC5Q9Y5F6 944 aa12.26□□□□□ -0.45
CHRNB3-201ENST00000289957 RALGAPA2Q2PPJ7 1873 aa12.26□□□□□ -0.45
CHRNB3-201ENST00000289957 ATXN2Q99700 1313 aaKnown RBP12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 MICAL3Q7RTP6 2002 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 PHACTR2O75167 634 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 UPP2O95045 317 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 TIMP1P01033 207 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 CXCL10P02778 98 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 RAG1P15918 1043 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 PBX3P40426 434 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 SKOR1P84550 965 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 ZBTB6Q15916 424 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 DUOXA2Q1HG44 320 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 CACNA2D4Q7Z3S7 1137 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 PPM1KQ8N3J5 372 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 C3orf58Q8NDZ4 430 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 BADQ92934 168 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 UBE2TQ9NPD8 197 aaPredicted RBP12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 GDF3Q9NR23 364 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 DPP3Q9NY33 737 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 UNC80Q8N2C7 3258 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 TTC3P53804 2025 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 GOLGA6CA6NDK9 693 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 CASTOR2A6NHX0 329 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 SPTLC1O15269 473 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 HCRTO43612 131 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 GOLGA6DP0CG33 693 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 YARSP54577 528 aaKnown RBP12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 CDH8P55286 799 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 DEFB103AP81534 67 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 ORC1Q13415 861 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 C10orf76Q5T2E6 689 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 CCDC181Q5TID7 509 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 SFMBT2Q5VUG0 894 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 OTOP2Q7RTS6 562 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 ZNF280BQ86YH2 543 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 USP38Q8NB14 1042 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 HASPINQ8TF76 798 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 PPP1R10Q96QC0 940 aaKnown RBP12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 LRRC1Q9BTT6 524 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 GOLGA6AQ9NYA3 693 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 AIPL1Q9NZN9 384 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 APEX2Q9UBZ4 518 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 DNAJC12Q9UKB3 198 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 AGAP1Q9UPQ3 857 aa12.25□□□□□ -0.45
CHRNB3-201ENST00000289957 IL18RAPO95256 599 aa12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 CPP00450 1065 aa12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 RPLP2P05387 115 aaKnown RBP12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 ITGB1P05556 798 aa12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 SSTR3P32745 418 aaPredicted RBP12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 MAGEA9P43362 315 aa12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 CORO7P57737 925 aa12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 NOP14P78316 857 aaKnown RBP12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 CFAP221Q4G0U5 840 aa12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 XKR4Q5GH76 650 aa12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 EMC10Q5UCC4 262 aa12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 C8orf74Q6P047 294 aa12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 SLC24A5Q71RS6 500 aa12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 SND1Q7KZF4 910 aaKnown RBP eCLIP12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 MRPL10Q7Z7H8 261 aaKnown RBP12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 CD302Q8IX05 232 aa12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 GSPT2Q8IYD1 628 aaKnown RBP12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 ASB7Q9H672 318 aa12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 RSAD1Q9HA92 442 aa12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 NXF1Q9UBU9 619 aaKnown RBP12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 SQORQ9Y6N5 450 aa12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 SPTBN5Q9NRC6 3674 aaKnown RBP12.24□□□□□ -0.45
CHRNB3-201ENST00000289957 GTPBP10A4D1E9 387 aaKnown RBP12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 FOXN3O00409 490 aaPredicted RBP12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 KIAA0355O15063 1070 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 WEE2P0C1S8 567 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 DRAP1Q14919 205 aaPredicted RBP12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 SLC18A3Q16572 532 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 CRIPAKQ8N1N5 446 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 ANKRD36BP1Q96IX9 119 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 SEZ6LQ9BYH1 1024 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 SDCBP2Q9H190 292 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 SMYD3Q9H7B4 428 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 HMGXB4Q9UGU5 601 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 DMGDHQ9UI17 866 aaKnown RBP12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 LCMT1Q9UIC8 334 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 C5orf42Q9H799 3197 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 I3L4J1 428 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 ZNF623O75123 536 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 DDHD2O94830 711 aa12.23□□□□□ -0.45
CHRNB3-201ENST00000289957 TNNC2P02585 160 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms