RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 CCDC186Q7Z3E2 898 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 BADQ92934 168 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 C18orf25Q96B23 403 aaPredicted RBP8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 KREMEN1Q96MU8 473 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 MIOSQ9NXC5 875 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 TRIP11Q15643 1979 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 UQCRHLA0A096LP55 91 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 LCA5LO95447 670 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 CST3P01034 146 aaPredicted RBP8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 DRAP1Q14919 205 aaPredicted RBP8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 TMEM139Q8IV31 216 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 CCDC50Q8IVM0 306 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 SP7Q8TDD2 431 aaPredicted RBP8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 MMS19Q96T76 1030 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 IFFO1Q0D2I5 559 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 ZFP42Q96MM3 310 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 CXCL16Q9H2A7 254 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 KIAA1257Q9ULG3 409 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 NR2E3Q9Y5X4 410 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 KIAA0100Q14667 2235 aaKnown RBP8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 KPNA7A9QM74 516 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 RBAK-RBAKDNI3L0D1 243 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 ARHGAP6O43182 974 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 CCZ1BP86790 482 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 CCZ1P86791 482 aaPredicted RBP8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 STILQ15468 1287 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 TMEM240Q5SV17 173 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 RRAGAQ7L523 313 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 GPR65Q8IYL9 337 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 BAG1Q99933 345 aaPredicted RBP8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 AJAP1Q9UKB5 411 aaPredicted RBP8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 PATJQ8NI35 1801 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 MEIS3P2A8K0S8 358 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 CILPO75339 1184 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 EFEMP2O95967 443 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 ODC1P11926 461 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 GLRA4Q5JXX5 417 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 C10orf76Q5T2E6 689 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 PPM1KQ8N3J5 372 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 GOLGA1Q92805 767 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 PKNOX2Q96KN3 472 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 SUSD3Q96L08 255 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 SYT11Q9BT88 431 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 PCDHB8Q9UN66 801 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 INPP5FQ9Y2H2 1132 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 RWDD3Q9Y3V2 267 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 SYNJ2BP-COX16A0A087WUM0 186 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 SYN3O14994 580 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 SH3BP5O60239 455 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 FGFR1P11362 822 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 ELAVL2Q12926 359 aaKnown RBP8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 TEX35Q5T0J7 233 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 HGSNATQ68CP4 663 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 C16orf59Q7L2K0 433 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 UBE2Q2Q8WVN8 375 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 TATDN2Q93075 761 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 LBHD1Q9BQE6 289 aaPredicted RBP8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 COLEC11Q9BWP8 271 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 COX16Q9P0S2 106 aa8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 BARX2Q9UMQ3 279 aaPredicted RBP8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 FNDC3AQ9Y2H6 1198 aaKnown RBP8.98□□□□□ -0.97
PTPDC1-201ENST00000288976 NLRC5Q86WI3 1866 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 LAG3P18627 525 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 LILRA4P59901 499 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 WDR59Q6PJI9 974 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 IRF2BP2Q7Z5L9 587 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 NOP9Q86U38 636 aaKnown RBP8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 APPL2Q8NEU8 664 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 ZNF653Q96CK0 615 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 NENFQ9UMX5 172 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 PRRC2BQ5JSZ5 2229 aaKnown RBP8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 RNF225M0QZC1 329 aaPredicted RBP8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 CCP110O43303 1012 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 TRAPPC3O43617 180 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 LHX1P48742 406 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 PDE6CP51160 858 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 ADKP55263 362 aaKnown RBP8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 TNS4Q8IZW8 715 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 PI4K2AQ9BTU6 479 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 CWH43Q9H720 699 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 CLCNKBP51801 687 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 GJB7Q6PEY0 223 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 CD300LGQ6UXG3 332 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 TRIM72Q6ZMU5 477 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 ZNF662Q6ZS27 426 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 RSRC2Q7L4I2 434 aaKnown RBP8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 CALR3Q96L12 384 aaKnown RBP8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 KCNF1Q9H3M0 494 aa8.97□□□□□ -0.97
PTPDC1-201ENST00000288976 TBKBP1A7MCY6 615 aa8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 ASTE1Q2TB18 679 aaPredicted RBP8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 WDR72Q3MJ13 1102 aa8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 SPOPLQ6IQ16 392 aa8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 PPP1R14CQ8TAE6 165 aa8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 NLRC4Q9NPP4 1024 aa8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 CISHQ9NSE2 258 aa8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 PCDHGC3Q9UN70 934 aa8.96□□□□□ -0.97
PTPDC1-201ENST00000288976 IKBKGQ9Y6K9 419 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms