RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 ORC1Q13415 861 aa23.3■■□□□ 1.32
PDLIM3-203ENST00000284771 ZNF394Q53GI3 561 aa23.3■■□□□ 1.32
PDLIM3-203ENST00000284771 FAM171A1Q5VUB5 890 aa23.3■■□□□ 1.32
PDLIM3-203ENST00000284771 IRF2BP2Q7Z5L9 587 aa23.3■■□□□ 1.32
PDLIM3-203ENST00000284771 ADGRF2Q8IZF7 708 aa23.3■■□□□ 1.32
PDLIM3-203ENST00000284771 RTP3Q9BQQ7 232 aa23.3■■□□□ 1.32
PDLIM3-203ENST00000284771 ABHD10Q9NUJ1 306 aa23.3■■□□□ 1.32
PDLIM3-203ENST00000284771 SPG21Q9NZD8 308 aa23.3■■□□□ 1.32
PDLIM3-203ENST00000284771 MYO6Q9UM54 1294 aa23.3■■□□□ 1.32
PDLIM3-203ENST00000284771 BARX2Q9UMQ3 279 aaPredicted RBP23.3■■□□□ 1.32
PDLIM3-203ENST00000284771 PCDHB8Q9UN66 801 aa23.3■■□□□ 1.32
PDLIM3-203ENST00000284771 PCDHB4Q9Y5E5 795 aa23.3■■□□□ 1.32
PDLIM3-203ENST00000284771 TRAPPC3O43617 180 aa23.29■■□□□ 1.32
PDLIM3-203ENST00000284771 SF3B1O75533 1304 aaKnown RBP eCLIP23.29■■□□□ 1.32
PDLIM3-203ENST00000284771 BMPR1AP36894 532 aa23.29■■□□□ 1.32
PDLIM3-203ENST00000284771 NDST1P52848 882 aa23.29■■□□□ 1.32
PDLIM3-203ENST00000284771 WDR59Q6PJI9 974 aa23.29■■□□□ 1.32
PDLIM3-203ENST00000284771 KLHL23Q8NBE8 558 aa23.29■■□□□ 1.32
PDLIM3-203ENST00000284771 OR8K1Q8NGG5 319 aa23.29■■□□□ 1.32
PDLIM3-203ENST00000284771 ELOVL4Q9GZR5 314 aa23.29■■□□□ 1.32
PDLIM3-203ENST00000284771 AAASQ9NRG9 546 aa23.29■■□□□ 1.32
PDLIM3-203ENST00000284771 AIPL1Q9NZN9 384 aa23.29■■□□□ 1.32
PDLIM3-203ENST00000284771 STXBP5LQ9Y2K9 1186 aa23.29■■□□□ 1.32
PDLIM3-203ENST00000284771 PCDHB12Q9Y5F1 795 aa23.29■■□□□ 1.32
PDLIM3-203ENST00000284771 CYP26A1O43174 497 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 GFPT2O94808 682 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 ODC1P11926 461 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 FGFR3P22607 806 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 WARSP23381 471 aaKnown RBP23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 USP8P40818 1118 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 STAT1P42224 750 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 ZNF132P52740 706 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 RAD23BP54727 409 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 RTP2Q5QGT7 225 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 KIAA0319Q5VV43 1072 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 CNGA4Q8IV77 575 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 ZNF397Q8NF99 534 aaPredicted RBP23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 OR6B3Q8NGW1 331 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 TMEM169Q96HH4 297 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 FGF18O76093 207 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 FAM163BP0C2L3 166 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 KRT5P13647 590 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 TYMPP19971 482 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 HNRNPH3P31942 346 aaKnown RBP23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 GNL1P36915 607 aaPredicted RBP23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 TAP1Q03518 808 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 ARID5AQ03989 594 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 CEP57Q86XR8 500 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 TMEM86AQ8N2M4 240 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 SLC4A11Q8NBS3 891 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 DPEP3Q9H4B8 488 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 CHST7Q9NS84 486 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 PLXNA4Q9HCM2 1894 aa23.28■■□□□ 1.32
PDLIM3-203ENST00000284771 SYN3O14994 580 aa23.27■■□□□ 1.32
PDLIM3-203ENST00000284771 TPM1P09493 284 aa23.27■■□□□ 1.32
PDLIM3-203ENST00000284771 PDGFRBP09619 1106 aa23.27■■□□□ 1.32
PDLIM3-203ENST00000284771 CCDC173Q0VFZ6 552 aa23.27■■□□□ 1.32
PDLIM3-203ENST00000284771 MRPL58Q14197 206 aaKnown RBP23.27■■□□□ 1.32
PDLIM3-203ENST00000284771 SFMBT2Q5VUG0 894 aa23.27■■□□□ 1.32
PDLIM3-203ENST00000284771 HGSNATQ68CP4 663 aa23.27■■□□□ 1.32
PDLIM3-203ENST00000284771 SLC47A2Q86VL8 602 aa23.27■■□□□ 1.32
PDLIM3-203ENST00000284771 RBBP8NLQ8NC74 664 aaPredicted RBP23.27■■□□□ 1.32
PDLIM3-203ENST00000284771 LPIN3Q9BQK8 851 aa23.27■■□□□ 1.32
PDLIM3-203ENST00000284771 FAM124BQ9H5Z6 455 aaPredicted RBP23.27■■□□□ 1.32
PDLIM3-203ENST00000284771 DDX43Q9NXZ2 648 aaKnown RBP23.27■■□□□ 1.32
PDLIM3-203ENST00000284771 MTUS1Q9ULD2 1270 aa23.27■■□□□ 1.32
PDLIM3-203ENST00000284771 OAZ2O95190 189 aa23.26■■□□□ 1.31
PDLIM3-203ENST00000284771 SKILP12757 684 aa23.26■■□□□ 1.31
PDLIM3-203ENST00000284771 ACAT1P24752 427 aaKnown RBP23.26■■□□□ 1.31
PDLIM3-203ENST00000284771 PPM1AP35813 382 aa23.26■■□□□ 1.31
PDLIM3-203ENST00000284771 PLCB3Q01970 1234 aa23.26■■□□□ 1.31
PDLIM3-203ENST00000284771 ELAVL2Q12926 359 aaKnown RBP23.26■■□□□ 1.31
PDLIM3-203ENST00000284771 OVOS1Q6IE37 1185 aa23.26■■□□□ 1.31
PDLIM3-203ENST00000284771 DDX53Q86TM3 631 aaKnown RBP23.26■■□□□ 1.31
PDLIM3-203ENST00000284771 SYN2Q92777 582 aaPredicted RBP23.26■■□□□ 1.31
PDLIM3-203ENST00000284771 ZSWIM1Q9BR11 485 aa23.26■■□□□ 1.31
PDLIM3-203ENST00000284771 A8MXQ7 604 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 SOD2P04179 222 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 CTNNB1P35222 781 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 YWHAEP62258 255 aaKnown RBP23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 YWHAHQ04917 246 aaPredicted RBP23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 CCDC142Q17RM4 750 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 VARS2Q5ST30 1063 aaKnown RBP23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 UNC93AQ86WB7 457 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 NUCKS1Q9H1E3 243 aaKnown RBP23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 NKX2-4Q9H2Z4 354 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 SNX25Q9H3E2 840 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 DSEQ9UL01 958 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 CARNS1A5YM72 827 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 C5orf67F2Z3F1 127 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 ATP2C2O75185 946 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 PLEKP08567 350 aaPredicted RBP23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 LHX1P48742 406 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 ACOT1Q86TX2 421 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 C12orf29Q8N999 325 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 OR10T2Q8NGX3 314 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 TMEM176AQ96HP8 235 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 TMEM209Q96SK2 561 aa23.25■■□□□ 1.31
PDLIM3-203ENST00000284771 CHP1Q99653 195 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms