RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 MNX1P50219 401 aaPredicted RBP22.32■■□□□ 1.16
YBX3-202ENST00000279550 KYAT1Q16773 422 aa22.32■■□□□ 1.16
YBX3-202ENST00000279550 AADACL2Q6P093 401 aa22.32■■□□□ 1.16
YBX3-202ENST00000279550 APBB1IPQ7Z5R6 666 aaPredicted RBP22.32■■□□□ 1.16
YBX3-202ENST00000279550 C1orf127Q8N9H9 656 aa22.32■■□□□ 1.16
YBX3-202ENST00000279550 AENQ8WTP8 325 aaKnown RBP22.32■■□□□ 1.16
YBX3-202ENST00000279550 ZSWIM1Q9BR11 485 aa22.32■■□□□ 1.16
YBX3-202ENST00000279550 TRIM7Q9C029 511 aa22.32■■□□□ 1.16
YBX3-202ENST00000279550 AVENQ9NQS1 362 aaPredicted RBP22.32■■□□□ 1.16
YBX3-202ENST00000279550 CISHQ9NSE2 258 aa22.32■■□□□ 1.16
YBX3-202ENST00000279550 RPS6KA5O75582 802 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 HEXIM1O94992 359 aaKnown RBP22.31■■□□□ 1.16
YBX3-202ENST00000279550 RRM1P23921 792 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 SLC10A6Q3KNW5 377 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 FAM26DQ5JW98 314 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 ZNF618Q5T7W0 954 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 FAM126BQ8IXS8 530 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 ZBTB9Q96C00 473 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 RNPC3Q96LT9 517 aaKnown RBP22.31■■□□□ 1.16
YBX3-202ENST00000279550 GDAP1L1Q96MZ0 367 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 CARD9Q9H257 536 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 NR2E1Q9Y466 385 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 MROH7Q68CQ1 1323 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 MIF4GDA9UHW6 222 aaKnown RBP22.31■■□□□ 1.16
YBX3-202ENST00000279550 KRIT1O00522 736 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 NPTXRO95502 500 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 FGGP02679 453 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 CKBP12277 381 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 TNNT3P45378 269 aaPredicted RBP22.31■■□□□ 1.16
YBX3-202ENST00000279550 PEX5P50542 639 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 MAP9Q49MG5 647 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 TRIM72Q6ZMU5 477 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 CXorf38Q8TB03 319 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 EIF2AQ9BY44 585 aaKnown RBP22.31■■□□□ 1.16
YBX3-202ENST00000279550 GDF3Q9NR23 364 aa22.31■■□□□ 1.16
YBX3-202ENST00000279550 BRD2P25440 801 aaKnown RBP22.3■■□□□ 1.16
YBX3-202ENST00000279550 TNFRSF8P28908 595 aa22.3■■□□□ 1.16
YBX3-202ENST00000279550 NSFP46459 744 aaKnown RBP22.3■■□□□ 1.16
YBX3-202ENST00000279550 RAP1GAPP47736 663 aa22.3■■□□□ 1.16
YBX3-202ENST00000279550 GJA8P48165 433 aa22.3■■□□□ 1.16
YBX3-202ENST00000279550 POU5F1Q01860 360 aaKnown RBP22.3■■□□□ 1.16
YBX3-202ENST00000279550 FBXO47Q5MNV8 452 aa22.3■■□□□ 1.16
YBX3-202ENST00000279550 ZNF606Q8WXB4 792 aa22.3■■□□□ 1.16
YBX3-202ENST00000279550 C11orf70Q9BRQ4 267 aa22.3■■□□□ 1.16
YBX3-202ENST00000279550 DDX47Q9H0S4 455 aaKnown RBP22.3■■□□□ 1.16
YBX3-202ENST00000279550 ST3GAL5Q9UNP4 418 aa22.3■■□□□ 1.16
YBX3-202ENST00000279550 ESYT3A0FGR9 886 aa22.29■■□□□ 1.16
YBX3-202ENST00000279550 KRT19P08727 400 aa22.29■■□□□ 1.16
YBX3-202ENST00000279550 GRM5P41594 1212 aa22.29■■□□□ 1.16
YBX3-202ENST00000279550 GUCY2FP51841 1108 aa22.29■■□□□ 1.16
YBX3-202ENST00000279550 GUCY2DQ02846 1103 aa22.29■■□□□ 1.16
YBX3-202ENST00000279550 PTP4A2Q12974 167 aa22.29■■□□□ 1.16
YBX3-202ENST00000279550 ZNF394Q53GI3 561 aa22.29■■□□□ 1.16
YBX3-202ENST00000279550 CASKIN2Q8WXE0 1202 aa22.29■■□□□ 1.16
YBX3-202ENST00000279550 TRIM6Q9C030 488 aaPredicted RBP22.29■■□□□ 1.16
YBX3-202ENST00000279550 SDCBP2Q9H190 292 aa22.29■■□□□ 1.16
YBX3-202ENST00000279550 AGO3Q9H9G7 860 aaKnown RBP22.29■■□□□ 1.16
YBX3-202ENST00000279550 NXF1Q9UBU9 619 aaKnown RBP22.29■■□□□ 1.16
YBX3-202ENST00000279550 H3BQF6 201 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 GPR182O15218 404 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 CD4P01730 458 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 MYBL1P10243 752 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 GHRP10912 638 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 NFX1Q12986 1120 aaKnown RBP22.28■■□□□ 1.16
YBX3-202ENST00000279550 SMC1AQ14683 1233 aaKnown RBP22.28■■□□□ 1.16
YBX3-202ENST00000279550 TRADDQ15628 312 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 MMS22LQ6ZRQ5 1243 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 PHF13Q86YI8 300 aaPredicted RBP22.28■■□□□ 1.16
YBX3-202ENST00000279550 TFAP2BQ92481 460 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 TRIM11Q96F44 468 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 OSBPL7Q9BZF2 842 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 WNT8AQ9H1J5 351 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 EPB41L5Q9HCM4 733 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 ANAPC7Q9UJX3 599 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 SPOPO43791 374 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 ITGB3P05106 788 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 CTNNA2P26232 953 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 CARSP49589 748 aaKnown RBP22.28■■□□□ 1.16
YBX3-202ENST00000279550 LPIN1Q14693 890 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 KCTD19Q17RG1 926 aaPredicted RBP22.28■■□□□ 1.16
YBX3-202ENST00000279550 UBL4BQ8N7F7 174 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 ACAP3Q96P50 834 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 CXCL16Q9H2A7 254 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 ADAM22Q9P0K1 906 aa22.28■■□□□ 1.16
YBX3-202ENST00000279550 CCDC188H7C350 402 aa22.27■■□□□ 1.16
YBX3-202ENST00000279550 SART1O43290 800 aaKnown RBP22.27■■□□□ 1.16
YBX3-202ENST00000279550 CTNNA1P35221 906 aaKnown RBP22.27■■□□□ 1.16
YBX3-202ENST00000279550 ATN1P54259 1190 aaPredicted RBP22.27■■□□□ 1.16
YBX3-202ENST00000279550 UBXN11Q5T124 520 aa22.27■■□□□ 1.16
YBX3-202ENST00000279550 TWF2Q6IBS0 349 aaKnown RBP22.27■■□□□ 1.16
YBX3-202ENST00000279550 TRAF7Q6Q0C0 670 aa22.27■■□□□ 1.16
YBX3-202ENST00000279550 SLC39A5Q6ZMH5 540 aa22.27■■□□□ 1.16
YBX3-202ENST00000279550 ADAT2Q7Z6V5 191 aaKnown RBP22.27■■□□□ 1.16
YBX3-202ENST00000279550 BCO2Q9BYV7 579 aa22.27■■□□□ 1.16
YBX3-202ENST00000279550 NXF3Q9H4D5 531 aaKnown RBP22.27■■□□□ 1.16
YBX3-202ENST00000279550 ASB7Q9H672 318 aa22.27■■□□□ 1.16
YBX3-202ENST00000279550 ERVK-5Q9HDB9 667 aa22.27■■□□□ 1.16
YBX3-202ENST00000279550 PADI3Q9ULW8 664 aa22.27■■□□□ 1.16
YBX3-202ENST00000279550 SQORQ9Y6N5 450 aa22.27■■□□□ 1.16
YBX3-202ENST00000279550 BHMG1C9JSJ3 638 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms