RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SESTD1Q86VW0 696 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 LINC01465Q8N7H1 131 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 CCDC114Q96M63 670 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 TRIM6Q9C030 488 aaPredicted RBP19.04■□□□□ 0.64
CAPN1-201ENST00000279247 MRPL47Q9HD33 250 aaKnown RBP19.04■□□□□ 0.64
CAPN1-201ENST00000279247 AVENQ9NQS1 362 aaPredicted RBP19.04■□□□□ 0.64
CAPN1-201ENST00000279247 CHST7Q9NS84 486 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 SLC5A4Q9NY91 659 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 BCCIPQ9P287 314 aaKnown RBP eCLIP19.04■□□□□ 0.64
CAPN1-201ENST00000279247 SLC15A5A6NIM6 579 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 IL18RAPO95256 599 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 MYBL1P10243 752 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 MCF2P10911 925 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 CAPN2P17655 700 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 CUL1Q13616 776 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 TRIM72Q6ZMU5 477 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 UBA3Q8TBC4 463 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 WHAMMQ8TF30 809 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 CEP83Q9Y592 693 aa19.04■□□□□ 0.64
CAPN1-201ENST00000279247 UNCXA6NJT0 531 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 PROSCO94903 275 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 RALAP11233 206 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 ATF7P17544 494 aaPredicted RBP19.03■□□□□ 0.64
CAPN1-201ENST00000279247 MMP8P22894 467 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 PPP1R7Q15435 360 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 CCDC25Q86WR0 208 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 WDTC1Q8N5D0 677 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 EMC1Q8N766 993 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.03■□□□□ 0.64
CAPN1-201ENST00000279247 FEZF2Q8TBJ5 459 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 HEXIM2Q96MH2 286 aaKnown RBP19.03■□□□□ 0.64
CAPN1-201ENST00000279247 ERP44Q9BS26 406 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 PARVAQ9NVD7 372 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 TREHO43280 583 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 KRT10P13645 584 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 PTP4A2Q12974 167 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 TCEAL1Q15170 157 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 ODF2Q5BJF6 829 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 UBR7Q8N806 425 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 FBXO25Q8TCJ0 367 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 EMID1Q96A84 441 aaPredicted RBP19.03■□□□□ 0.64
CAPN1-201ENST00000279247 RAB17Q9H0T7 212 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.03■□□□□ 0.64
CAPN1-201ENST00000279247 CNTN6Q9UQ52 1028 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.03■□□□□ 0.64
CAPN1-201ENST00000279247 PPEF2O14830 753 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 SLC10A3P09131 477 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 HSD17B3P37058 310 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 PSMC4P43686 418 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 PRUNE1Q86TP1 453 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 PHF13Q86YI8 300 aaPredicted RBP19.03■□□□□ 0.64
CAPN1-201ENST00000279247 HAUS1Q96CS2 278 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 DNAJC17Q9NVM6 304 aaKnown RBP19.03■□□□□ 0.64
CAPN1-201ENST00000279247 DPP3Q9NY33 737 aa19.03■□□□□ 0.64
CAPN1-201ENST00000279247 R3HDM2Q9Y2K5 976 aaKnown RBP19.03■□□□□ 0.64
CAPN1-201ENST00000279247 ATP1A2P50993 1020 aa19.02■□□□□ 0.64
CAPN1-201ENST00000279247 SMTNL2Q2TAL5 461 aa19.02■□□□□ 0.64
CAPN1-201ENST00000279247 TTMPQ5BVD1 217 aa19.02■□□□□ 0.64
CAPN1-201ENST00000279247 TXNRD3NBQ6F5E7 133 aa19.02■□□□□ 0.64
CAPN1-201ENST00000279247 KAT2BQ92831 832 aa19.02■□□□□ 0.64
CAPN1-201ENST00000279247 FMO2Q99518 471 aa19.02■□□□□ 0.64
CAPN1-201ENST00000279247 CYTH4Q9UIA0 394 aa19.02■□□□□ 0.64
CAPN1-201ENST00000279247 ANK1P16157 1881 aa19.02■□□□□ 0.64
CAPN1-201ENST00000279247 TNPO2O14787 897 aaKnown RBP19.02■□□□□ 0.63
CAPN1-201ENST00000279247 CTNNA2P26232 953 aa19.02■□□□□ 0.63
CAPN1-201ENST00000279247 OGDHQ02218 1023 aa19.02■□□□□ 0.63
CAPN1-201ENST00000279247 PTPN20Q4JDL3 420 aa19.02■□□□□ 0.63
CAPN1-201ENST00000279247 ANKS1BQ7Z6G8 1248 aa19.02■□□□□ 0.63
CAPN1-201ENST00000279247 C12orf29Q8N999 325 aa19.02■□□□□ 0.63
CAPN1-201ENST00000279247 PIK3R5Q8WYR1 880 aa19.02■□□□□ 0.63
CAPN1-201ENST00000279247 C18orf25Q96B23 403 aaPredicted RBP19.02■□□□□ 0.63
CAPN1-201ENST00000279247 ELOVL4Q9GZR5 314 aa19.02■□□□□ 0.63
CAPN1-201ENST00000279247 NXF3Q9H4D5 531 aaKnown RBP19.02■□□□□ 0.63
CAPN1-201ENST00000279247 TLL2Q9Y6L7 1015 aa19.02■□□□□ 0.63
CAPN1-201ENST00000279247 CITO14578 2027 aa19.01■□□□□ 0.63
CAPN1-201ENST00000279247 MANSC4A6NHS7 340 aaPredicted RBP19.01■□□□□ 0.63
CAPN1-201ENST00000279247 SMIM23A6NLE4 172 aa19.01■□□□□ 0.63
CAPN1-201ENST00000279247 M0QYV0 167 aa19.01■□□□□ 0.63
CAPN1-201ENST00000279247 CHRNA3P32297 505 aa19.01■□□□□ 0.63
CAPN1-201ENST00000279247 COILP38432 576 aaPredicted RBP19.01■□□□□ 0.63
CAPN1-201ENST00000279247 RAD23BP54727 409 aa19.01■□□□□ 0.63
CAPN1-201ENST00000279247 CAP1Q01518 475 aa19.01■□□□□ 0.63
CAPN1-201ENST00000279247 PLEKHA7Q6IQ23 1121 aa19.01■□□□□ 0.63
CAPN1-201ENST00000279247 TMEM40Q8WWA1 233 aa19.01■□□□□ 0.63
CAPN1-201ENST00000279247 DDX27Q96GQ7 796 aaKnown RBP19.01■□□□□ 0.63
CAPN1-201ENST00000279247 PLVAPQ9BX97 442 aa19.01■□□□□ 0.63
CAPN1-201ENST00000279247 NFKBIZQ9BYH8 718 aa19.01■□□□□ 0.63
CAPN1-201ENST00000279247 RASAL2Q9UJF2 1139 aa19.01■□□□□ 0.63
CAPN1-201ENST00000279247 PIN4Q9Y237 131 aaKnown RBP19.01■□□□□ 0.63
CAPN1-201ENST00000279247 SNX9Q9Y5X1 595 aa19.01■□□□□ 0.63
CAPN1-201ENST00000279247 SCINQ9Y6U3 715 aa19.01■□□□□ 0.63
CAPN1-201ENST00000279247 A0A1B0GUA9 196 aa19.01■□□□□ 0.63
CAPN1-201ENST00000279247 RPL21P46778 160 aaKnown RBP19.01■□□□□ 0.63
CAPN1-201ENST00000279247 C1QBPQ07021 282 aaKnown RBP19.01■□□□□ 0.63
CAPN1-201ENST00000279247 MFSD10Q14728 455 aa19.01■□□□□ 0.63
CAPN1-201ENST00000279247 UAP1Q16222 522 aaPredicted RBP19.01■□□□□ 0.63
CAPN1-201ENST00000279247 FAM76AQ8TAV0 307 aa19.01■□□□□ 0.63
CAPN1-201ENST00000279247 GCOM2Q9BZD3 368 aaPredicted RBP19.01■□□□□ 0.63
CAPN1-201ENST00000279247 KCNT1Q5JUK3 1230 aa19■□□□□ 0.63
CAPN1-201ENST00000279247 ZMAT2Q96NC0 199 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms