RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 ZBTB48P10074 688 aaPredicted RBP5.1□□□□□ -1.59
CD44-202ENST00000278385 CKMT1AP12532 417 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 XBP1P17861 261 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 PI3P19957 117 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 PDIA3P30101 505 aaKnown RBP5.1□□□□□ -1.59
CD44-202ENST00000278385 TNNT2P45379 298 aaPredicted RBP5.1□□□□□ -1.59
CD44-202ENST00000278385 GPR3P46089 330 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 AFF3P51826 1226 aaKnown RBP5.1□□□□□ -1.59
CD44-202ENST00000278385 KPNA1P52294 538 aaPredicted RBP5.1□□□□□ -1.59
CD44-202ENST00000278385 MAPK10P53779 464 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 ADKP55263 362 aaKnown RBP5.1□□□□□ -1.59
CD44-202ENST00000278385 HSD17B7P56937 341 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 SCAND1P57086 179 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 FOXO4P98177 505 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 CYP4F3Q08477 520 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 CDC16Q13042 620 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 SCARB2Q14108 478 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 CLUL1Q15846 466 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 NTRK3Q16288 839 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 DENND5AQ6IQ26 1287 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 TATDN1Q6P1N9 297 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 ABRAXAS1Q6UWZ7 409 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 TTLL7Q6ZT98 887 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 KRT74Q7RTS7 529 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 KDELC2Q7Z4H8 507 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 HEATR4Q86WZ0 1026 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 NLGN4XQ8N0W4 816 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 Q8N1Y9 231 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 MIER2Q8N344 545 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 ANKRD52Q8NB46 1076 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 UCMAQ8WVF2 138 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 CPA5Q8WXQ8 436 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 RAPGEF4Q8WZA2 1011 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 JADE3Q92613 823 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 PHKBQ93100 1093 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 FBXW5Q969U6 566 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 JAM3Q9BX67 310 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 B3GNT5Q9BYG0 378 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 PANK3Q9H999 370 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 JMJD4Q9H9V9 463 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 GCM1Q9NP62 436 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 SLC6A20Q9NP91 592 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 DACT1Q9NYF0 836 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 MYOTQ9UBF9 498 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 MTRRQ9UBK8 725 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 RRP15Q9Y3B9 282 aaKnown RBP5.1□□□□□ -1.59
CD44-202ENST00000278385 SIT1Q9Y3P8 196 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 PCDHA5Q9Y5H7 936 aa5.1□□□□□ -1.59
CD44-202ENST00000278385 SMG6Q86US8 1419 aaKnown RBP5.09□□□□□ -1.59
CD44-202ENST00000278385 NSD3Q9BZ95 1437 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 INSRP06213 1382 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 SOS1Q07889 1333 aaPredicted RBP5.09□□□□□ -1.59
CD44-202ENST00000278385 PGPEP1LA6NFU8 196 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 GOLGA6L22H0YM25 854 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 INO80B-WBP1J3KQ70 363 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 SGSM2O43147 1006 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 IRAK2O43187 625 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 HOXC11O43248 304 aaPredicted RBP5.09□□□□□ -1.59
CD44-202ENST00000278385 USO1O60763 962 aaKnown RBP5.09□□□□□ -1.59
CD44-202ENST00000278385 TADA3O75528 432 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 SKAP2O75563 359 aaPredicted RBP5.09□□□□□ -1.59
CD44-202ENST00000278385 CYP7B1O75881 506 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 UBXN7O94888 489 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 HSPA4LO95757 839 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 APOA4P06727 396 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 ATP2A2P16615 1042 aaKnown RBP5.09□□□□□ -1.59
CD44-202ENST00000278385 DESP17661 470 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 PDE6CP51160 858 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 UBXN2AP68543 259 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 PPP2R5BQ15173 497 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 TAF5Q15542 800 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 CRY1Q16526 586 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 TXNRD1Q16881 649 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 NPNTQ6UXI9 565 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 MFSD6Q6ZSS7 791 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 GALNTL5Q7Z4T8 443 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 LRRTM4Q86VH4 590 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 NLRP10Q86W26 655 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 CMIPQ8IY22 773 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 SYTL1Q8IYJ3 562 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 RTKN2Q8IZC4 609 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 CAMKK1Q8N5S9 505 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 SIMC1Q8NDZ2 872 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 LILRB1Q8NHL6 650 aaPredicted RBP5.09□□□□□ -1.59
CD44-202ENST00000278385 LMBR1Q8WVP7 490 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 BRI3BPQ8WY22 251 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 LRTOMTQ8WZ04 291 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 JAKMIP2Q96AA8 810 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 MVB12AQ96EY5 273 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 TOE1Q96GM8 510 aaKnown RBP5.09□□□□□ -1.59
CD44-202ENST00000278385 DESI2Q9BSY9 194 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 MAGEH1Q9H213 219 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 DIAPH3Q9NSV4 1193 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 COMMD8Q9NX08 183 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 STK32BQ9NY57 414 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 B4GALT6Q9UBX8 382 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 BLOC1S6Q9UL45 172 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 MAGED2Q9UNF1 606 aaPredicted RBP5.09□□□□□ -1.59
CD44-202ENST00000278385 TRAF6Q9Y4K3 522 aa5.09□□□□□ -1.59
CD44-202ENST00000278385 PCDHGB2Q9Y5G2 931 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms