RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 DKC1O60832 514 aaKnown RBP eCLIP16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 RARBP10826 455 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 PRKCIP41743 596 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 PIK3CAP42336 1068 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 ADCY7P51828 1080 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 KIF22Q14807 665 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 TRIP13Q15645 432 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 LRRC6Q86X45 466 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 C12orf65Q9H3J6 166 aaKnown RBP16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 TBCCD1Q9NVR7 557 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 NINJ2Q9NZG7 142 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 SIPA1L1O43166 1804 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 A0A0A6YYK5 440 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 ZWINTO95229 277 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 GDF11O95390 407 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 UQCRBP14927 111 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 TAL1P17542 331 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 PEX2P28328 305 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 TNNI2P48788 182 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 CHN2P52757 468 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 SNAP25P60880 206 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 PPIDQ08752 370 aaKnown RBP16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 SPDYAQ5MJ70 313 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 TMEM214Q6NUQ4 689 aaKnown RBP16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 CPNE8Q86YQ8 564 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 FLAD1Q8NFF5 587 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.56■□□□□ 0.249e-7■□□□□ 9.2
CTDSP1-201ENST00000273062 PYDC1Q8WXC3 89 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 SENP6Q9GZR1 1112 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 SELENONQ9NZV5 590 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 LGALS13Q9UHV8 139 aa16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.56■□□□□ 0.24
CTDSP1-201ENST00000273062 A8MXQ7 604 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 OXSR1O95747 527 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 CTNNA2P26232 953 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 CD300CQ08708 224 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 PPP2R5EQ16537 467 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 MDH1BQ5I0G3 518 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 GLYCTKQ8IVS8 523 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 SLC7A5P1Q8MH63 180 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 ERMNQ8TAM6 284 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 C9orf72Q96LT7 481 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 ARMC7Q9H6L4 198 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 EURLQ9NYK6 297 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 CROTQ9UKG9 612 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 POTEMA6NI47 508 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 H3BRJ5 948 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 EEF2P13639 858 aaKnown RBP16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 JAG1P78504 1218 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 FKBP3Q00688 224 aaKnown RBP16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 EN1Q05925 392 aaPredicted RBP16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 KCNH2Q12809 1159 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 CALCOCO2Q13137 446 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 SPARCL1Q14515 664 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 STRIP1Q5VSL9 837 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 MAML1Q92585 1016 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 TDRD3Q9H7E2 651 aaKnown RBP16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 TAS2R14Q9NYV8 317 aa16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 FAM32AQ9Y421 112 aaKnown RBP16.55■□□□□ 0.24
CTDSP1-201ENST00000273062 POTEFA5A3E0 1075 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 LAD1O00515 517 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 HNRNPCL1O60812 293 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 CDH16O75309 829 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 POTEIP0CG38 1075 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 ESRRAP11474 423 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 COILP38432 576 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 RPL5P46777 297 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 CLPPQ16740 277 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 MMEL1Q495T6 779 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 POTEEQ6S8J3 1075 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 GIPC3Q8TF64 312 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 ZNF75CPQ92670 426 aaPredicted RBP16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 USP6NLQ92738 828 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 SLC7A8Q9UHI5 535 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 TSC22D4Q9Y3Q8 395 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 PNMA6FA0A0J9YX94 578 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 ESYT2A0FGR8 921 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 XPOTO43592 962 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 TRMUO75648 421 aaKnown RBP16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 CLPTM1O96005 669 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 AP2B1P63010 937 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 PDE1BQ01064 536 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 BCL2A1Q16548 175 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 RHBDF2Q6PJF5 856 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 ANKRD35Q8N283 1001 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 TSG101Q99816 390 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 NUDT12Q9BQG2 462 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 MAGEF1Q9HAY2 307 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 ADAMTS6Q9UKP5 1117 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 ZNF148Q9UQR1 794 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 NEU2Q9Y3R4 380 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 ZMYM2Q9UBW7 1377 aa16.54■□□□□ 0.24
CTDSP1-201ENST00000273062 TTLL13PA6NNM8 815 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 YDJCA8MPS7 323 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 H3BSA7 217 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 BIRC5O15392 142 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 CYP26A1O43174 497 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 RAP1GDS1P52306 607 aa16.53■□□□□ 0.24
CTDSP1-201ENST00000273062 NPEPPSP55786 919 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms