RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 OGTO15294 1046 aa13.23□□□□□ -0.29
UBXN4-201ENST00000272638 TBC1D12O60347 775 aa13.23□□□□□ -0.29
UBXN4-201ENST00000272638 EFNA5P52803 228 aa13.23□□□□□ -0.29
UBXN4-201ENST00000272638 OVGP1Q12889 678 aa13.23□□□□□ -0.29
UBXN4-201ENST00000272638 MYBPC2Q14324 1141 aa13.23□□□□□ -0.29
UBXN4-201ENST00000272638 HIF1AQ16665 826 aa13.23□□□□□ -0.29
UBXN4-201ENST00000272638 SPATA18Q8TC71 538 aa13.23□□□□□ -0.29
UBXN4-201ENST00000272638 ACTL9Q8TC94 416 aa13.23□□□□□ -0.29
UBXN4-201ENST00000272638 C17orf75Q9HAS0 396 aa13.23□□□□□ -0.29
UBXN4-201ENST00000272638 PDGFCQ9NRA1 345 aa13.23□□□□□ -0.29
UBXN4-201ENST00000272638 UTRNP46939 3433 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 ATRNL1Q5VV63 1379 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 DYNC1LI2O43237 492 aaPredicted RBP13.22□□□□□ -0.29
UBXN4-201ENST00000272638 MYBL1P10243 752 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 KCNA2P16389 499 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 RPS12P25398 132 aaKnown RBP13.22□□□□□ -0.29
UBXN4-201ENST00000272638 NCKAP1LP55160 1127 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 VPS52Q8N1B4 723 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 RAB6BQ9NRW1 208 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.22□□□□□ -0.293e-6■□□□□ 9.7
UBXN4-201ENST00000272638 G3BP2Q9UN86 482 aaKnown RBP13.22□□□□□ -0.29
UBXN4-201ENST00000272638 SHANK3Q9BYB0 1731 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 A0A1B0GUL6 1792 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 A8MXQ7 604 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 OTUD4Q01804 1114 aaKnown RBP13.22□□□□□ -0.29
UBXN4-201ENST00000272638 FOXR2Q6PJQ5 311 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 TRIM72Q6ZMU5 477 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 NIPA1Q7RTP0 329 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 MAP7D3Q8IWC1 876 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.22□□□□□ -0.29
UBXN4-201ENST00000272638 MCUR1Q96AQ8 359 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 GMLQ99445 158 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 CGRRF1Q99675 332 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 DCLK3Q9C098 648 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 HES2Q9Y543 173 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 XIRP1Q702N8 1843 aaKnown RBP13.22□□□□□ -0.29
UBXN4-201ENST00000272638 NCANO14594 1321 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 ZNF541Q9H0D2 1346 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 PLCH1Q4KWH8 1693 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 NFKBIEO00221 500 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 CREB3O43889 395 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 NPTXRO95502 500 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 MYCP01106 439 aaPredicted RBP13.22□□□□□ -0.29
UBXN4-201ENST00000272638 HNRNPH1P31943 449 aaKnown RBP13.22□□□□□ -0.29
UBXN4-201ENST00000272638 FNTAP49354 379 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 ARL4CP56559 192 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 BCAR1P56945 870 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 UBAP2Q5T6F2 1119 aaKnown RBP13.22□□□□□ -0.29
UBXN4-201ENST00000272638 CATSPERGQ6ZRH7 1159 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 C3orf62Q6ZUJ4 267 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 ACOT1Q86TX2 421 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 ZNF516Q92618 1163 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 FERMT1Q9BQL6 677 aa13.22□□□□□ -0.29
UBXN4-201ENST00000272638 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.22□□□□□ -0.29
UBXN4-201ENST00000272638 TNRC6CQ9HCJ0 1690 aaKnown RBP13.21□□□□□ -0.29
UBXN4-201ENST00000272638 KCNN4O15554 427 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 GCNT1Q02742 428 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 ZACNQ401N2 412 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 AFG1LQ8WV93 481 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 MAML1Q92585 1016 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 MARCOQ9UEW3 520 aaPredicted RBP13.21□□□□□ -0.29
UBXN4-201ENST00000272638 NOCTQ9UK39 431 aaKnown RBP13.21□□□□□ -0.29
UBXN4-201ENST00000272638 ADCY3O60266 1144 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 CDH16O75309 829 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 TCF4P15884 667 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 SSTR1P30872 391 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 CLNS1AP54105 237 aaKnown RBP13.21□□□□□ -0.29
UBXN4-201ENST00000272638 MYO1EQ12965 1108 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 SLC39A4Q6P5W5 647 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 NLGN2Q8NFZ4 835 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 BORCS6Q96GS4 357 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 HPDLQ96IR7 371 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 PORCNQ9H237 461 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 SNX25Q9H3E2 840 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 ETNK1Q9HBU6 452 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 KLC4Q9NSK0 619 aa13.21□□□□□ -0.29
UBXN4-201ENST00000272638 CPP00450 1065 aa13.21□□□□□ -0.3
UBXN4-201ENST00000272638 TROVE2P10155 538 aaKnown RBP eCLIP13.21□□□□□ -0.3
UBXN4-201ENST00000272638 INSRRP14616 1297 aa13.21□□□□□ -0.3
UBXN4-201ENST00000272638 RFC1P35251 1148 aaPredicted RBP13.21□□□□□ -0.3
UBXN4-201ENST00000272638 NME3Q13232 169 aa13.21□□□□□ -0.3
UBXN4-201ENST00000272638 MAMLD1Q13495 774 aa13.21□□□□□ -0.3
UBXN4-201ENST00000272638 MXD4Q14582 209 aaPredicted RBP13.21□□□□□ -0.3
UBXN4-201ENST00000272638 PSMD6Q15008 389 aa13.21□□□□□ -0.3
UBXN4-201ENST00000272638 IER5Q5VY09 327 aa13.21□□□□□ -0.3
UBXN4-201ENST00000272638 CHST13Q8NET6 341 aa13.21□□□□□ -0.3
UBXN4-201ENST00000272638 RDM1Q8NG50 284 aa13.21□□□□□ -0.3
UBXN4-201ENST00000272638 SH3GL2Q99962 352 aa13.21□□□□□ -0.3
UBXN4-201ENST00000272638 ASCC2Q9H1I8 757 aaPredicted RBP13.21□□□□□ -0.3
UBXN4-201ENST00000272638 KIF9Q9HAQ2 790 aa13.21□□□□□ -0.3
UBXN4-201ENST00000272638 APOBEC3GQ9HC16 384 aaKnown RBP13.21□□□□□ -0.3
UBXN4-201ENST00000272638 LRRC4CQ9HCJ2 640 aa13.21□□□□□ -0.3
UBXN4-201ENST00000272638 ZNF214Q9UL59 606 aaPredicted RBP13.21□□□□□ -0.3
UBXN4-201ENST00000272638 NAALADL1Q9UQQ1 740 aa13.21□□□□□ -0.3
UBXN4-201ENST00000272638 BTAF1O14981 1849 aa13.21□□□□□ -0.3
UBXN4-201ENST00000272638 BTNL10A8MVZ5 291 aa13.2□□□□□ -0.3
UBXN4-201ENST00000272638 RARBP10826 455 aa13.2□□□□□ -0.3
UBXN4-201ENST00000272638 PECAM1P16284 738 aaPredicted RBP13.2□□□□□ -0.3
UBXN4-201ENST00000272638 SDC4P31431 198 aa13.2□□□□□ -0.3
UBXN4-201ENST00000272638 SKOR1P84550 965 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms