RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 C5orf60A6NFR6 353 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 KIAA0355O15063 1070 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 ZC3H11AO75152 810 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRIM43-201ENST00000272395 VTNP04004 478 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 CKBP12277 381 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 COMTP21964 271 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 MAN1A1P33908 653 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 CCL23P55773 120 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 CDR2Q01850 454 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 MLLT1Q03111 559 aaPredicted RBP9.29□□□□□ -0.92
TRIM43-201ENST00000272395 MKRN4PQ13434 485 aaPredicted RBP9.29□□□□□ -0.92
TRIM43-201ENST00000272395 SNRNP35Q16560 246 aaKnown RBP9.29□□□□□ -0.92
TRIM43-201ENST00000272395 SKIDA1Q1XH10 827 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 C6orf118Q5T5N4 469 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 EFCAB12Q6NXP0 572 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 C6orf89Q6UWU4 347 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 MAEAQ7L5Y9 396 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 OTUD6AQ7L8S5 288 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 NOP9Q86U38 636 aaKnown RBP9.29□□□□□ -0.92
TRIM43-201ENST00000272395 MAP4K3Q8IVH8 894 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 PRELID2Q8N945 189 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 OR2W6PQ8NHA6 318 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 MAIP1Q8WWC4 291 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 MAGOHBQ96A72 148 aaKnown RBP9.29□□□□□ -0.92
TRIM43-201ENST00000272395 TMEM143Q96AN5 459 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 CYFIP2Q96F07 1278 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 MFSD14AQ96MC6 490 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 NT5C1BQ96P26 610 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 OSBPL7Q9BZF2 842 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 TBX20Q9UMR3 447 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 NOVA2Q9UNW9 492 aaKnown RBP9.29□□□□□ -0.92
TRIM43-201ENST00000272395 ATP8A1Q9Y2Q0 1164 aa9.29□□□□□ -0.92
TRIM43-201ENST00000272395 H0YCG3 227 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 SLC16A4O15374 487 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 RAG1P15918 1043 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 LIG3P49916 1009 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 PDE6CP51160 858 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 POLGP54098 1239 aaPredicted RBP9.28□□□□□ -0.92
TRIM43-201ENST00000272395 PEX3P56589 373 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 MAGOHP61326 146 aaKnown RBP9.28□□□□□ -0.92
TRIM43-201ENST00000272395 GCNT1Q02742 428 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 ADCY2Q08462 1091 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 DMP1Q13316 513 aaPredicted RBP9.28□□□□□ -0.92
TRIM43-201ENST00000272395 ZNF211Q13398 564 aaPredicted RBP9.28□□□□□ -0.92
TRIM43-201ENST00000272395 MESDQ14696 234 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 EMC2Q15006 297 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 ZNF618Q5T7W0 954 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 TRAF7Q6Q0C0 670 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 ZDHHC24Q6UX98 284 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 MMS22LQ6ZRQ5 1243 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 SYDE1Q6ZW31 735 aaPredicted RBP9.28□□□□□ -0.92
TRIM43-201ENST00000272395 TAX1BP1Q86VP1 789 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 SLC13A5Q86YT5 568 aaPredicted RBP9.28□□□□□ -0.92
TRIM43-201ENST00000272395 SUGP1Q8IWZ8 645 aaKnown RBP9.28□□□□□ -0.92
TRIM43-201ENST00000272395 KIAA0319LQ8IZA0 1049 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 CNPY4Q8N129 248 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 PPM1KQ8N3J5 372 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 TMEM161BQ8NDZ6 487 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 FBXL13Q8NEE6 735 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 ZNF564Q8TBZ8 553 aaPredicted RBP9.28□□□□□ -0.92
TRIM43-201ENST00000272395 PLEKHO2Q8TD55 490 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 PARD3BQ8TEW8 1205 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 TRIM11Q96F44 468 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 SCLYQ96I15 445 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 KREMEN1Q96MU8 473 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 PCDHB18PQ96TA0 734 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 ACTR5Q9H9F9 607 aaPredicted RBP9.28□□□□□ -0.92
TRIM43-201ENST00000272395 ERVK-5Q9HDB9 667 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 GPRC5CQ9NQ84 441 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 AVENQ9NQS1 362 aaPredicted RBP9.28□□□□□ -0.92
TRIM43-201ENST00000272395 XPNPEP1Q9NQW7 623 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 GRHL1Q9NZI5 618 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 BCCIPQ9P287 314 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRIM43-201ENST00000272395 ALPK3Q96L96 1907 aa9.28□□□□□ -0.92
TRIM43-201ENST00000272395 SMIM35A0A1B0GVV1 85 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 ANKRD65E5RJM6 399 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 CYP26A1O43174 497 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 SPOPO43791 374 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 MAFO75444 373 aaPredicted RBP9.27□□□□□ -0.93
TRIM43-201ENST00000272395 AGTP01019 485 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 ADRB2P07550 413 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 MYBL1P10243 752 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 CYP11B1P15538 503 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 GARTP22102 1010 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 RFC5P40937 340 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 SEC24CP53992 1094 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 PLTPP55058 493 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 RWDD2BP57060 319 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 BPIFB4P59827 614 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 FMO1Q01740 532 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 ACAD10Q6JQN1 1059 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 PPP1R2P3Q6NXS1 205 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 TAF2Q6P1X5 1199 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 CCDC137Q6PK04 289 aaKnown RBP9.27□□□□□ -0.93
TRIM43-201ENST00000272395 TRMT10CQ7L0Y3 403 aaKnown RBP9.27□□□□□ -0.93
TRIM43-201ENST00000272395 LRRC8DQ7L1W4 858 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 ZNF677Q86XU0 584 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 LINC01465Q8N7H1 131 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 MCPH1Q8NEM0 835 aa9.27□□□□□ -0.93
TRIM43-201ENST00000272395 HELQQ8TDG4 1101 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms